| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3700 |
|---|
| Symbol | ruvA |
|---|
| ID | 4673394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3919477 |
|---|
| End bp | 3920049 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639840732 |
|---|
| Product | Holliday junction DNA helicase RuvA |
|---|
| Protein accession | YP_987887 |
|---|
| Protein GI | 121595991 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
|---|
| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.129488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.95279 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGGCA AATTGACCGG CACGCTGCTG GAAAAGAACC CCCCCGAGGT GCTGGTGGAC
TGCCACGGCG TGGGCTACGA GGTGCAGGTC AGCATGAGCA CCTTCTACAA CCTGCCCGCC
GTGGGCGAGC GGGTGAGCCT GCTCACGCAG TTCATCGTGC GCGAGGATGC GCAGTTGCTG
TACGGCTTTG GCACGGCGCA GGAGCGCCAG GCGTTTCGCG AACTCATCAA GATCAGCGGC
GTGGGGCCGC GCACAGCGCT GTCCATCCTC TCGGGCATGG GCGTGGCGGA CCTGGCGCAG
GCCGTTTCGC TGCAGGAAGC AGGGCGCCTG GTCAAAGTGC CGGGTATCGG CAAGAAAACC
GCCGAGCGGC TGCTGCTGGA GCTGAAAGGC AAGCTGGGCG CGGACGTCGG CGTGCGCGCG
CATGCGGCCA ACGACAACCA GGCCGACATC CTGCAGGCGC TGCTGGCCCT GGGCTATAAC
GACAAGGAGG CCGCCGCTGC GCTCAAGGCG CTGCCGGCGG ATGTGGGAGT GAGCGAGGGG
ATCAAGCTGG CGCTGAAGTC CCTGTCCAAG TAA
|
|---|
| Protein sequence | MIGKLTGTLL EKNPPEVLVD CHGVGYEVQV SMSTFYNLPA VGERVSLLTQ FIVREDAQLL
YGFGTAQERQ AFRELIKISG VGPRTALSIL SGMGVADLAQ AVSLQEAGRL VKVPGIGKKT
AERLLLELKG KLGADVGVRA HAANDNQADI LQALLALGYN DKEAAAALKA LPADVGVSEG
IKLALKSLSK
|
|---|
| |