| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3693 |
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| Symbol | |
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| ID | 4673446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3908593 |
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| End bp | 3910386 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639840725 |
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| Product | YhhN family protein |
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| Protein accession | YP_987880 |
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| Protein GI | 121595984 |
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| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
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| COG ID | [COG3000] Sterol desaturase
[COG3714] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.392021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCA GCCAGATCAT CGTCCTCGTC ACCCCGGTGT TCCTCGCCCT CATGGCGCTG
GAATGGGCCA TCGGCCGTTG GCGCGGGCGG CCCGCGTTGC GGCTGGCCGA TGCGGTGAGC
AGCGTCAGCC TGGGCATGCT CAGCCAGACC AGCGCGGTGT TCACCGTGCT GCTGCGCGTG
GGGCTGTACA CGCTGGCCTA TGAGCACCTG GCGCTGTGGC GCAGCGAGGC GTTCTGGACC
ACCTGGTACG GCTGGTTCAT CGCGCTGGTG TTCTACGACT TCTGCTACTA CTGGCTGCAC
CGCATGGGGC ACGAAGTGGC CGTGCTGTGG GCCGCGCATG CGGTGCACCA CCAGAGCCAG
GACTACAACC TGTCCACCGC GCTGCGCCAG ACCAGTTCCG GCGCGGTCCT GGGCTGGGTG
TTCTACCTGC CGATGGCGCT GGCGGGCGTG CCGCCGCTGG TGTTCGTGGT GGTGGGGCTG
GTCGACCTGC TGTACCAGTT CTGGGTGCAT ACCGAGCAGG TGGGGCGGCT GGGCTGGTTC
GACCGCTGGT TCTGCAGCCC CAGCAACCAC CGCGTGCACC ACGCCGTGAA CGACAGCTAC
CTGGACAAGA ACTACGGCGG CATCCTGATC GTGTGGGACC GGCTGTTCGG TACCTTCAAG
GACGAGGACC CGCGGGAGAA ATGCGTGTAC GGCACGCGCG GCCTGCTCAA CAGCTGGGAC
CCGCTCTGGG CCAACGCCCA GGTGTATGCA GGCCTGCTGC ACGACAGCTG GCACGCCCGC
CGCTGGGCGG ACAAGCTGCG CGTGTGGCTG AAAGCCCCCG GCTGGCGCCC CGCCGACGTG
GCGCAGCGCT TTCCCAAGCC GGCCTTCCAC CTCCACGACA TGCCCCTGTT CGACCCGCCC
CTGTCCGCGC CGCTGCGCTG GTTTGCCGGC GTGCAGTTCG TGCTGCTGCT GGCGGGCGTG
GCGGCATTCC TGTGGCAGGC CGACGGCGCA CCGCTGGCGA CCAACGCCGT GTGGTTCGCC
ACGCTGCTGG CCTGCCAGTG GGCGCTGGGC GCGGCCATGC AGGGGCGCAT TGGCATGGGG
TTGGCGCTGA TGATCGAAGC CGGGGCGCTG GCCACGGCGA CCAGCGCGCT GGGGTTCACG
GCGTGGCACC TGCTGTTCAA GCCGCTGACC ATGGCGATTG CTATCACTTA TGTAGCTAAT
CACGCTTATC CAATGAGCGC TACCGGCCGT TTTGGCTTGA ACCGATCATG CTGGCTGCTG
CTGGGCGCGC TGCTGGGTTC GCTGGCGGGC GACGTGTTCC TGATGCTGTC AGAGCACCTG
TTCATTCCCG GGCTGGTGAG CTTCCTGCTG GCGCACCTGT GCTACATCGC GCTGTTCAAG
CAGGGCGTGG GGTGGTTCGG CCACCGCGGG GCACTCGGGG GTACGCTGGC GCTGGGCATC
GGCATGTACG CCTTCCTGTG GCAGGGCGGG TTGCCGGCCG CGCTGCGGGT GCCGGTGGCC
GTGTATGTGG TGGTGATCGC GCTGATGGCG GCGCAGGCCT GGGGGCGCCA CGCGGCGCTG
CGCGAGCGCT CGTCGCTTGC GGTGGCGCTG GGCGCGTGCT GCTTCATGCT CAGCGATTCG
CTGCTGGCCA CCAACCGCTT CGTGCAGCCG CTGCCCTTGT CGCAGTTGTG GGTGCTGGCC
ACCTACTATG CGGCCCAGGT GCTCATCGTG AGCGGGATGG TCACAGCGCT GACCCGCAGC
GCAGCGCACC AAGCCGACGC ACGGACCCAG CCGCTCACCC CCCACGCGGC CTGA
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| Protein sequence | MSGSQIIVLV TPVFLALMAL EWAIGRWRGR PALRLADAVS SVSLGMLSQT SAVFTVLLRV
GLYTLAYEHL ALWRSEAFWT TWYGWFIALV FYDFCYYWLH RMGHEVAVLW AAHAVHHQSQ
DYNLSTALRQ TSSGAVLGWV FYLPMALAGV PPLVFVVVGL VDLLYQFWVH TEQVGRLGWF
DRWFCSPSNH RVHHAVNDSY LDKNYGGILI VWDRLFGTFK DEDPREKCVY GTRGLLNSWD
PLWANAQVYA GLLHDSWHAR RWADKLRVWL KAPGWRPADV AQRFPKPAFH LHDMPLFDPP
LSAPLRWFAG VQFVLLLAGV AAFLWQADGA PLATNAVWFA TLLACQWALG AAMQGRIGMG
LALMIEAGAL ATATSALGFT AWHLLFKPLT MAIAITYVAN HAYPMSATGR FGLNRSCWLL
LGALLGSLAG DVFLMLSEHL FIPGLVSFLL AHLCYIALFK QGVGWFGHRG ALGGTLALGI
GMYAFLWQGG LPAALRVPVA VYVVVIALMA AQAWGRHAAL RERSSLAVAL GACCFMLSDS
LLATNRFVQP LPLSQLWVLA TYYAAQVLIV SGMVTALTRS AAHQADARTQ PLTPHAA
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