| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3674 |
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| Symbol | |
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| ID | 4673621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3888528 |
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| End bp | 3889976 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639840706 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_987861 |
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| Protein GI | 121595965 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0102483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACC ACCAGAACAA CTCCCCCATG ATGACGCTGC ACCAGGCGTT TGATCTGCTG
CGCGCCCGCA TTCCTGGTGT GCGACTGGTC GGCGAAGGTG CCACGCCGCT CGCGCGCGCG
CACACCGATA CCCGCACGCT GGCCGCAGGT GACCTGTTCG TGGCGCTCAA GGGTGAGCGT
TTCGATGCGC ACCAGTTTCT GTCCCAGGCG CGAAGGGCCG GCGCCGCGGC GGCCATTGCG
CATGCGGGCC TGGCCGACGC CGGTCTGCCC GGCATCGAGG TCCCCGACAC CCTGGCCGCC
CTGGGTGCGC TGGCCGCTGG CTGGCGCGCG CAGCGGGATC TGCCGCTGAT CGCCGTGACC
GGCAGCAACG GCAAGACCAC GGTCACGCAA ATGATCGCGG CGGTGCTGCG GGCCTGGAAA
GGCGACGCCG CGCTGGCCAC ACAGGGCAAC TTCAATAACG ACGTGGGCGT GCCCCTCACG
CTGCTGCGCC TGCGGCCGGG CCATGAGGCT GCGGTGGTCG AGTTGGGCAT GAACCATCCC
GGCGAGATCG CGAATCTGGC GGACATTGCC CGGCCCACCG TGGCCCTGGT CAACAACGCC
CAGCGCGAGC ACCTGGAATT CATGCACACG GTCGAGGCCG TGGCGCGCGA GAACGGCAGC
GTGCTGTCTG CCCTGCCGGC CGATGGCACG GCTGTGTTCC CGGCGGCAGA TGCCTTCACG
CCCTTGTGGC GCGAGCTGGC CGGCACGCGG CACTGCCTGA CCTTTGGTGA GACCGCGGGC
GAGGTGCGTT GCGCCGCTGC GCAATGGGGC GGCGGTGCTT GGCAGGTGCG CATTGACACC
CCCAACGGCG CATTCGATAC GCGGCTGGCC ATCGCAGGGC GCCACAACGT CACCAATGCC
CTGGCCGCCA CCGCCTGCGC GTTGGCGGCG GGGGTGCCTC TGGCGAGCAT TGCGCAAGGG
CTGGCGGCTT TCGCGCCGGT CAACGGGCGC TCGCGGGCGC TGGCCGTGCG TTGCGGGGGG
CGTTCCATCA CGGTGGTGGA CGACAGCTAC AACGCCAACC CCGACTCGGT GCATGCGGCC
ATCGAGGTGT TGGCCGCACT GCCTGGCCCG CGCCTGCTGG TGCTGGGGGA TATGGGCGAG
GTGGGCGACC AGGGGCCGCA GTTCCACGCC GAGGCCGGCG CGCACGCCCG TGCGCGCGGC
ATCGAGCAGC TGTTTGCGCT GGGCGACCTG AGCGCCCACG CCGTGCAGGC CTGTGGGACG
GCCGCACGGC ATTTCAAGGA CATGGCCACG CTGCAGGCCG CAGTGGGGCA GGCCCTGCCC
ACGGTGGGCA GCGTGCTGGT GAAGGGATCG CGATTCATGA AGATGGAACA GGTCGTGCAG
GCGCTGCAGG CACTGCATGA GGACGGCGCC GCAGGCGCGG CCGCGCAAGG GGGAGCCGCA
TGCTGCTGA
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| Protein sequence | MSHHQNNSPM MTLHQAFDLL RARIPGVRLV GEGATPLARA HTDTRTLAAG DLFVALKGER
FDAHQFLSQA RRAGAAAAIA HAGLADAGLP GIEVPDTLAA LGALAAGWRA QRDLPLIAVT
GSNGKTTVTQ MIAAVLRAWK GDAALATQGN FNNDVGVPLT LLRLRPGHEA AVVELGMNHP
GEIANLADIA RPTVALVNNA QREHLEFMHT VEAVARENGS VLSALPADGT AVFPAADAFT
PLWRELAGTR HCLTFGETAG EVRCAAAQWG GGAWQVRIDT PNGAFDTRLA IAGRHNVTNA
LAATACALAA GVPLASIAQG LAAFAPVNGR SRALAVRCGG RSITVVDDSY NANPDSVHAA
IEVLAALPGP RLLVLGDMGE VGDQGPQFHA EAGAHARARG IEQLFALGDL SAHAVQACGT
AARHFKDMAT LQAAVGQALP TVGSVLVKGS RFMKMEQVVQ ALQALHEDGA AGAAAQGGAA
CC
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