| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3672 |
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| Symbol | murD |
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| ID | 4673631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3885470 |
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| End bp | 3886966 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639840704 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_987859 |
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| Protein GI | 121595963 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.185384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.820879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGTGC TGGGTCTGGG CGCCTCGGGC CTGGCCATGG CGCGCTGGTG TGTGCGCTGT
GGTGCGCAGG TCACCGTGGC CGACACGCGC AGCAGTCCGC CGCAGCTGGC GGTGCTGCGC
GCAGAACTGC CGCAGGTGGA GTTCATCGCC GGCGCCTTCG ATGAGACCCT GGTGCAGGGG
CGCGCGCTGC ACGCGGTATA CCGTTCGCCA GGTCTGAGTC CGAATGAGAT TGCTCCTGTT
GTTATAGCTG CTCGCGCCCG CCAGATAAGC GTGGAAGGCG AATTGGGTTT GTATGCGCAG
GCGCTGCGCG AGCTGCGCGC CGGTCAGGGC TACGCGCCCG CGGTGCTGGC CATCACTGGC
ACCAATGGCA AAACCACCGT GACCTCGCTC ACGGGGCTGC TGGTGGAGTG CGCGGACAAG
CGCGTGGCGG TGGCCGGCAA CATCGGCCCC ACGCTGCTGG ATACGCTGGC GCAGCACATC
GACGCGGGCA CGCTGCCCGA GGTGTGGGTG CTGGAGCTGT CGAGCTTTCA GCTCGATGGC
GTGCAGGGCT TCGAGCCCAC AGCCGCGGCC GTGCTCAACA TCACGCAGGA CCACCTGGAC
TGGCACGGCA GCCTGCAGGC CTACGCACAG GCCAAGGGGC GCATCTTCGG CGAAACCGGC
CTCATGGTGC TCAACCGCGA GGACGCGGAA GTCATGGCCC TGCTGCCACC GCCAGTGCGC
GTGAAGCTGC AAAAGCCCCA GTTGCGCGCA CACGTGACCT TCGGTGGCGA CATGCCGCAG
CGCCCGGGGG ACTTCGGCAT CGAGGTGGTC AGCGGCATGG CCTGGCTGGT GCGTGCACAC
GAAGCGGACG AAACGGCCAA GCGCGGCAAG GCGCAGGACG CCGAGCTGCA CATCCAGCGC
CTGATGCCCG CCGACGCGCT GCGCATCCGC GGGCGGCACA ACGCCATCAA TGCCCTGGCT
GCGCTGGCGC TGGCCCAGGC TGCGGGCTGC CCGCTCGCGC CCATGCTCTA CGGCCTGCGC
GAATACCGCG GCGAGCCGCA CCGCGTGGAG TCCGTGGGCA TCGTGCGCGA GGTGGAGTAC
TTCGACGACA GCAAGGGCAC CAACGTGGGC GCCACGGTGG CTGCGCTGAC CGGGCTGGGC
GCCGACCGGC GCCTGGTGGT GATCCTGGGT GGCGACGGCA AGGGTCAGGA CTTCTCGCCG
CTGGCCGCGC CCGTGGCGCG CTATGCGCGC GCGGTGGTGT TGATCGGGCG CGACGCGCCG
CAGATCCGCG CCGCGCTGCA GGGCTGCGGC GTGCCGCTGC AGGACGCCGC CACGCTGCCC
GAGGCCGTGC AGTTGGCCAC ACAGCGCGCC CATGCGGGCG ACGCCGTGCT GCTGTCGCCC
GCCTGCGCCA GCCTGGACAT GTTCGACAAC TACGCGCACC GCGCTCGCGT TTTCTGCGAA
GCCGTGCAGG CGCTGGCCGA AGACGCCGGC CAGACGCTGG AAGGAGGGAC GGCATGA
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| Protein sequence | MLVLGLGASG LAMARWCVRC GAQVTVADTR SSPPQLAVLR AELPQVEFIA GAFDETLVQG
RALHAVYRSP GLSPNEIAPV VIAARARQIS VEGELGLYAQ ALRELRAGQG YAPAVLAITG
TNGKTTVTSL TGLLVECADK RVAVAGNIGP TLLDTLAQHI DAGTLPEVWV LELSSFQLDG
VQGFEPTAAA VLNITQDHLD WHGSLQAYAQ AKGRIFGETG LMVLNREDAE VMALLPPPVR
VKLQKPQLRA HVTFGGDMPQ RPGDFGIEVV SGMAWLVRAH EADETAKRGK AQDAELHIQR
LMPADALRIR GRHNAINALA ALALAQAAGC PLAPMLYGLR EYRGEPHRVE SVGIVREVEY
FDDSKGTNVG ATVAALTGLG ADRRLVVILG GDGKGQDFSP LAAPVARYAR AVVLIGRDAP
QIRAALQGCG VPLQDAATLP EAVQLATQRA HAGDAVLLSP ACASLDMFDN YAHRARVFCE
AVQALAEDAG QTLEGGTA
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