Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3668 |
Symbol | ddl |
ID | 4673646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3880474 |
End bp | 3881472 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639840700 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_987855 |
Protein GI | 121595959 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.497942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA ATGACCTCAA GATTGATGTG AAGGCGCTGG GCAAAGTGGC CGTGCTCATG GGGGGCACGT CGGCCGAGCG TGAGGTGTCG CTGATGTCGG GCGGCGGCGT GCTGCAGGCG CTGCGCTCGC GTGGCGTGGA CGCGCATGCG TTCGACCCCG CGCACAGTGA TCTGTCGGAG CTCAAGGCCC ACGGCTACAG CCGCTGCTTC ATCGCGCTGC ACGGCCGCCA TGGCGAGGAC GGTACGGTGC AGGGCGCGCT GGAGCTGCTG GGCATTCCGT ACACCGGTCC CGGCGTGATG GCGTCCAGCA TCGCCATGGA CAAGATCATG ACCAAGCGCA TCTGGCGCGC GGACGGCTTG CCCACGCCAG ACTGGCGCCT GGTGTCCAGC AGTGCGGAGA CGGCTCAGGC ATTCCAGGAG CTGGGCGCGC CGATGATCGT CAAGCCCTCG CGCGAGGGCT CCACCATCGG CCTGACCAAG GTCACTTCGC TGGGGCAGTG CGAACAGGCA TATCGGCTGG CCGCGCAGCA TGACCCCGAG GTGCTGTGCG AGCAGTTCAT CGATGGTGAC GAGACCACCT GTCCCATACT GGGCCAAGGC ACCGAGGCGC GCGCGCTGCC GGTGATCCGC ATCGAAGCGC CGCAAGGCAA CTACGACTAC CAGAACAAGT ACTTCACCGA CGTCACGCAG TACCACTGCC CGAGCGGCCT GCCCGAGGCC GAGGAGCGCG AGATCCAGCG CATCGTCGTG CAGGCTTACC GTACGCTGGG TTGCCGCGGC TGGGCGCGCG CCGACATCAT GATCCGCGCG AGCGACCGCA AGCCCTTCCT GCTGGAAATC AACACCTCGC CTGGCATGAC CGGCCACTCG CTGGTGCCGA TGTCGGCCAA TGCCAGCGGC ATCAGCTACC CCGACCTGTG CCTGCGCATC CTGGCGAGCG CGTCGCTGGA CGCGCTGCAG GGCCGGGCCG GTGCGGCAGG AGGACGGGAG TCGGTATGA
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Protein sequence | MSQNDLKIDV KALGKVAVLM GGTSAEREVS LMSGGGVLQA LRSRGVDAHA FDPAHSDLSE LKAHGYSRCF IALHGRHGED GTVQGALELL GIPYTGPGVM ASSIAMDKIM TKRIWRADGL PTPDWRLVSS SAETAQAFQE LGAPMIVKPS REGSTIGLTK VTSLGQCEQA YRLAAQHDPE VLCEQFIDGD ETTCPILGQG TEARALPVIR IEAPQGNYDY QNKYFTDVTQ YHCPSGLPEA EEREIQRIVV QAYRTLGCRG WARADIMIRA SDRKPFLLEI NTSPGMTGHS LVPMSANASG ISYPDLCLRI LASASLDALQ GRAGAAGGRE SV
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