| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3657 |
|---|
| Symbol | |
|---|
| ID | 4674216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3866713 |
|---|
| End bp | 3867435 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639840689 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_987844 |
|---|
| Protein GI | 121595948 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGGCG CACTGCGCTG GTGCATGCTG GTGCTGCTGG CACTGCTGGC GCTGCAGCTG
TTCTTCGTGG CGCGCATCGC GGCCATGGCG GTGATCGACC CGGAATCCAC CACGTTCCAG
CGGTCCGAGG CCTGGGCGCA ATGGTCCCAA GGCAGCGGCG TGCGCTGGCG CCAGCAGTGG
GTGCCGTACG CACAGATATC CGACCACCTC AAGCGCGCGG TGGTCGCATC GGAGGACGAC
AACTTCGTCA ACCACGACGG CGTGGACTGG GATGCCATCG AAAAGGCCTG GGAGCGCAAT
GCGCGCATCG AGGCGCAACT GGCCGCCCGG CCGTCGGCCA CGGGCCGCGC GCCCAAGATC
CGCGGCGGCT CCACCATCAC CCAGCAACTG GCCAAGAACC TGCTGCTGTC GGGCGAGCGC
AACCTGGTGC GCAAGGGGCA GGAATTCGTG CTCTCCCTGG CGCTGGAGCA ACTCCTGCCC
AAGCAGCGCA TCCTGGAGAT CTACCTGAAC AACGTGGAAT GGGGGGCAGG CGTGTTCGGC
GCCGAGGCCG CCGCGCAGCG CTACTTCGGC AAGAGCGCGC GCCAGCTCAC CGCGCCCGAG
GCCGCGCGCC TGGCCGTGAT GCTGCCGGCG CCCAAACGCT TCGAGAAGGC GCCCGGCTCG
GCCTACCTGG CCGGGCGCAC GCGCGCGCTG CTGGCGCGCA TGGGGCGCAG CGAGTTGCCC
TGA
|
|---|
| Protein sequence | MRGALRWCML VLLALLALQL FFVARIAAMA VIDPESTTFQ RSEAWAQWSQ GSGVRWRQQW
VPYAQISDHL KRAVVASEDD NFVNHDGVDW DAIEKAWERN ARIEAQLAAR PSATGRAPKI
RGGSTITQQL AKNLLLSGER NLVRKGQEFV LSLALEQLLP KQRILEIYLN NVEWGAGVFG
AEAAAQRYFG KSARQLTAPE AARLAVMLPA PKRFEKAPGS AYLAGRTRAL LARMGRSELP
|
|---|
| |