Gene Ajs_3656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3656 
SymbolaroE 
ID4674125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3865861 
End bp3866709 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID639840688 
Productshikimate 5-dehydrogenase 
Protein accessionYP_987843 
Protein GI121595947 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CCGCCGACCT CTACTGCGTG ATGGGCAATC CCATCGCCCA TAGCCGCTCG 
CCGTGGATCC ACGCGCGCTT TGCCCAACTG ACGGGCCAGT CGCTGCACTA CGAGCGCCGC
CTGGTTCCGC TGGACGGCTT CGCCCAGGCG CTGCAGAGCT TCGCCGCCGA AGGCGGGCGC
GGCTGCAACA TCACCGTGCC GTTCAAGCTG GAGGCCGCGC AGCTGGCCAC CACGCGCAGC
GAGCGCGTGC AGTTGGCCGG CGCGGCCAAT ACCCTCGTGT TCGACGGCGG CAGCATCCAT
GCCGACAACA CCGACGGCCT GGGCCTGGTG GCCGACATCA CGCAAGGCGC GGGCGTTCCG
CTCGCCGGGC GCGACGTGTT GCTGGTGGGC GCGGGCGGCG CGGCCGCCGG CGTGCTGGGC
CCGCTGCTGC GGCAGCACCC CCGGCGCATC GCCGTCGTGA ACCGCACGCC CGCGCGCGCC
CAGGCACTGG TGGACAGCCA CGCCGCGCTC GCAGCGCTAC AAAAAACAGA GCTACTGGCG
CTGGACATGC AAGCGCCAGG GGCCGATTTC GATGTGATCA TCAACGCCAC GGCCAGCAGC
CTGGAAGGCG GCCCGGTGCC CGTGCCCGCC AGCGTGCTGC GCCCCGGGAG CCTGGCCTAC
GACATGATGT ACGGCCCCGC GGCGCAGCCC TTTCTGGACT GGGCCACGGG CCACGGCGCC
ACCGCGCGCG ACGGGCTGGG CATGCTGGTG GAGCAGGCGG CCGAGGCGTT CCTGCTCTGG
CGCGGCGTGC GCCCGCCGTC GGCCCCGGTG CTGCAGGAGC TGCGCGCGGC CATCGCCGCG
GGGGCCTGA
 
Protein sequence
MTAAADLYCV MGNPIAHSRS PWIHARFAQL TGQSLHYERR LVPLDGFAQA LQSFAAEGGR 
GCNITVPFKL EAAQLATTRS ERVQLAGAAN TLVFDGGSIH ADNTDGLGLV ADITQGAGVP
LAGRDVLLVG AGGAAAGVLG PLLRQHPRRI AVVNRTPARA QALVDSHAAL AALQKTELLA
LDMQAPGADF DVIINATASS LEGGPVPVPA SVLRPGSLAY DMMYGPAAQP FLDWATGHGA
TARDGLGMLV EQAAEAFLLW RGVRPPSAPV LQELRAAIAA GA