Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3656 |
Symbol | aroE |
ID | 4674125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3865861 |
End bp | 3866709 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639840688 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_987843 |
Protein GI | 121595947 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG CCGCCGACCT CTACTGCGTG ATGGGCAATC CCATCGCCCA TAGCCGCTCG CCGTGGATCC ACGCGCGCTT TGCCCAACTG ACGGGCCAGT CGCTGCACTA CGAGCGCCGC CTGGTTCCGC TGGACGGCTT CGCCCAGGCG CTGCAGAGCT TCGCCGCCGA AGGCGGGCGC GGCTGCAACA TCACCGTGCC GTTCAAGCTG GAGGCCGCGC AGCTGGCCAC CACGCGCAGC GAGCGCGTGC AGTTGGCCGG CGCGGCCAAT ACCCTCGTGT TCGACGGCGG CAGCATCCAT GCCGACAACA CCGACGGCCT GGGCCTGGTG GCCGACATCA CGCAAGGCGC GGGCGTTCCG CTCGCCGGGC GCGACGTGTT GCTGGTGGGC GCGGGCGGCG CGGCCGCCGG CGTGCTGGGC CCGCTGCTGC GGCAGCACCC CCGGCGCATC GCCGTCGTGA ACCGCACGCC CGCGCGCGCC CAGGCACTGG TGGACAGCCA CGCCGCGCTC GCAGCGCTAC AAAAAACAGA GCTACTGGCG CTGGACATGC AAGCGCCAGG GGCCGATTTC GATGTGATCA TCAACGCCAC GGCCAGCAGC CTGGAAGGCG GCCCGGTGCC CGTGCCCGCC AGCGTGCTGC GCCCCGGGAG CCTGGCCTAC GACATGATGT ACGGCCCCGC GGCGCAGCCC TTTCTGGACT GGGCCACGGG CCACGGCGCC ACCGCGCGCG ACGGGCTGGG CATGCTGGTG GAGCAGGCGG CCGAGGCGTT CCTGCTCTGG CGCGGCGTGC GCCCGCCGTC GGCCCCGGTG CTGCAGGAGC TGCGCGCGGC CATCGCCGCG GGGGCCTGA
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Protein sequence | MTAAADLYCV MGNPIAHSRS PWIHARFAQL TGQSLHYERR LVPLDGFAQA LQSFAAEGGR GCNITVPFKL EAAQLATTRS ERVQLAGAAN TLVFDGGSIH ADNTDGLGLV ADITQGAGVP LAGRDVLLVG AGGAAAGVLG PLLRQHPRRI AVVNRTPARA QALVDSHAAL AALQKTELLA LDMQAPGADF DVIINATASS LEGGPVPVPA SVLRPGSLAY DMMYGPAAQP FLDWATGHGA TARDGLGMLV EQAAEAFLLW RGVRPPSAPV LQELRAAIAA GA
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