| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3653 |
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| Symbol | |
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| ID | 4674322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3861975 |
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| End bp | 3862706 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639840685 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_987840 |
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| Protein GI | 121595944 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.150168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACCCAT CCGAGGACTT ACCGCAGGCG GCGGTTGTCA CTGCCATCCC GATCGCCGAC
CGTGCGGCGG ACGCGGCCTT GGTGACGCGC GCCCTCGCCG GCGAGGCGGG AGCCTTCGCC
GCCATCATGC GGCGCCACAA CCGGCTGATG TTTCGCGCCG CGCGCGGCGT GGTGTATGAC
GACGCCGAGG CGCAGGACGT GGTGCAGGAG GCCTATTTGC GCGCCTTCAC GCGGCTGCGG
GCCTTCCGCG GCGATGCCGC GCTGGGCACC TGGCTGGCGC GCATCTGCCT GCGCACGGCC
TTGGACGTCT TGCGCCGGCG TGCGCGCAGC GTGGCCATCG ACCCCGCGCA GGCCAGCGAC
CAGGAGCCGC AGCCGGAGGA TGCCATGTCC TATTTCGCCC CGCCCGACGA CGCGCCCGAC
CAGGCACTTG CGCGTGCCCA GTTGCGCGCC CTGCTGGAGT CGGCCGTGCA CAGCCTGCCG
CCGCTGTACC GCAGCGTGTT CCTCCTGCGT GCCGTGCAGG AGATGAGCGT GCAGGAGGCG
GCCTTCTGCC TGGACATCAG CGAAGAGCTG GTGCGCACCC GCTACCTGCG TTCGCGCGCC
ATGTTGCGCG ACGCGCTGGG CGCGCGGGTG GAAGCCTGCG CCGACAGCGT CTTTCCGTTT
GCGGGCGCGC GCTGCGACCA GGTCGTGCAG CAGGTGCTGG ACGCACTGGC GCGGCGCGGG
CTGCTGGCCT GA
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| Protein sequence | MHPSEDLPQA AVVTAIPIAD RAADAALVTR ALAGEAGAFA AIMRRHNRLM FRAARGVVYD
DAEAQDVVQE AYLRAFTRLR AFRGDAALGT WLARICLRTA LDVLRRRARS VAIDPAQASD
QEPQPEDAMS YFAPPDDAPD QALARAQLRA LLESAVHSLP PLYRSVFLLR AVQEMSVQEA
AFCLDISEEL VRTRYLRSRA MLRDALGARV EACADSVFPF AGARCDQVVQ QVLDALARRG
LLA
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