Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3642 |
Symbol | |
ID | 4674434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3849526 |
End bp | 3850950 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639840675 |
Product | UDP-N-acetylmuramate |
Protein accession | YP_987830 |
Protein GI | 121595934 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATAC ACATCCTGGG CATCTGCGGC ACGTTCATGG GCGGCCTGGC CGCGCTGGCG CGCGAGGCGG GCCACCGTGT CACCGGCTGC GACGCCGGCG TCTACCCTCC CATGAGCGAC CAGTTGCGCG CCTTGGGAAT AGAGTTGATC GAAGGCTATG GCGCCGACCA GCTCGCGCTG AAGCCCGACA TGTTCGTGGT GGGCAACGTG GTCAGCCGCG CGCGGCTGGC GGACGGCACG CCGAAGTTTC CGCTGATGGA GGCCATCCTC GACGCGGGCG CGCCCTATAC CAGCGGGCCG CAATGGCTGG CCGAGCATGT GCTGCAGGGC CGCCATGTGC TGGCCGTCGC CGGCACGCAC GGCAAGACGA CCACCACGTC CATGCTGGCC TGGATTCTGG AATGCGCGGG CCTGGCGCCC GGCTTCCTGG TGGGCGGTGT GCCGATGAAC TTCGGCGTAT CCGCGCGTCT GGGCGCACCC GTACGGCCCC TGGCCGGGCC AGGACCGCTC GCCACGGCGC CGCTGTTCGT GATCGAGGCG GATGAATATG ACACCGCGTT CTTCGACAAG CGCAGCAAAT TCGTGCACTA CCGCCCCCGT ACCGCCGTGC TGAACAACCT GGAGTTCGAT CACGCCGACA TCTTTGACGA CCTGGGCCAG ATCGAACGGC AGTTCCACCA CTTGGTGCGC ACGGTGCCGC CCTCGGGCCG CGTGGTGGTC AACGGGCTGG AGGAGAGCCT GGCACGCGTA CTGCACGCCG GCTGCTGGAG CGGCGTGGCC AACTTTGGCA CCGCGGTGAG CGACTTCGGC GCGCAAGGCG AGCCGCACGA TTTCGAGGTG CTGCAGCGGG GCCGCACAGT GGCACGCGTG CAGTGGGCGC TGACGGGCGT GCACAACCAG CTCAATGCCC TCGCTGCCAT CGCGGCCGCC GAACATGTGG GCGTGACGCC GGCCCAGGCG GCCGAGGCGC TGGCGCGCTT CGAGAACGTC AAGCGCCGCA TGGAGCTGCG CGGCACGGTG CGGGGCATCG CTGTCTATGA CGACTTTGCG CACCATCCCA CGGCGCTGCG CACCACGCTG GACGGACTGC GCCGGCGCGT GGGCCCCAAG GGCGAAGGCC GCGGGCGCAT CCTGGCGGTG TTCGAGCCGC GCAGCAACAC CATGAAGCTG GGCACCATGA AGGCGCAGTT GCCCTGGGCG CTGGAGCCGG CCGACCTGGC CTTCTGCCAT ACCGCCGGCC TGGACTGGGA CGCCGCTGCG GCGCTGGCCC CCATGGGTGC GCGCGCGCAG ACGGCGGGCG ACCTGCCCAC GCTCGTGGGC CAGATCCGCG CGGTGGTGCA GCCGGGCGAC CACATCGTCT GCATGAGCAA CGGCAGCTTT GGCGGAGTGC ACGCCCAACT GCTCGCAGAA CTATCAAAAC AATAG
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Protein sequence | MHIHILGICG TFMGGLAALA REAGHRVTGC DAGVYPPMSD QLRALGIELI EGYGADQLAL KPDMFVVGNV VSRARLADGT PKFPLMEAIL DAGAPYTSGP QWLAEHVLQG RHVLAVAGTH GKTTTTSMLA WILECAGLAP GFLVGGVPMN FGVSARLGAP VRPLAGPGPL ATAPLFVIEA DEYDTAFFDK RSKFVHYRPR TAVLNNLEFD HADIFDDLGQ IERQFHHLVR TVPPSGRVVV NGLEESLARV LHAGCWSGVA NFGTAVSDFG AQGEPHDFEV LQRGRTVARV QWALTGVHNQ LNALAAIAAA EHVGVTPAQA AEALARFENV KRRMELRGTV RGIAVYDDFA HHPTALRTTL DGLRRRVGPK GEGRGRILAV FEPRSNTMKL GTMKAQLPWA LEPADLAFCH TAGLDWDAAA ALAPMGARAQ TAGDLPTLVG QIRAVVQPGD HIVCMSNGSF GGVHAQLLAE LSKQ
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