| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3629 |
|---|
| Symbol | |
|---|
| ID | 4674645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3833521 |
|---|
| End bp | 3835221 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639840662 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_987817 |
|---|
| Protein GI | 121595921 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCCA AGCTGGCAGC CGCCGCCTCT CCCCTGCCCT TTCATCGCCT GTGGAATGCC
TTCCTCACAG CGCGCGTGAT GGTGGCGCTG GCGCTGCTGC TGCTGCAGTT GCTGGGCATT
GCACTTAACC AGGCCGGCGA ACCGCTGCTG TTCAGCATCT GCCTGGGCTA CCTGGTGGCC
ACGGTGGCGC TGCGGGTGTG GGGGCACGGC GCGGTGCCCG ACCCGCGCCC CGGCATCCAG
TGGTTGCCTT CCATCGGGCT GGATCTGTTG CTGGTCAGCG TGCTGCAGGC GCTGCAGCAG
TCGGGCGGCT TGAATTTCAC GCCGTTGTTC GGGCTTCCGG TCCTGATGGC AGGCGTGCTG
GGATCCTTGA CACTGGCTCT GGCAACCACG GCCGGCGCCA CGCTGCTGCT GCTGGCCTGG
GCCTGGTGGC TGGGCACATA CGGCGGCGCC GGAGACGGCA CGCAGCGCTA CCTGCAGGCG
GCGTTGACAG GCACCGGCTA CTTCATCGTC GCCTATCTGG TGCACCTGCT GGCCGCCAAG
CTCACCAGCG AGCAGCAGAT GGCCCGGCGC AGCCAGATGG ATGCGCGCAC CCACCGCGCA
GTCAGTGCCC TGGTGATGCA GCACGTGGCC GATGGCGTGC TGGTGCTGGA CCTGCATGGC
CAGGTCCGCC TGGCCAACCC CGCGGCATTG CTGATGCTCG GCCACAAGAT CTCCGGAGAT
TCCTCCCTGA CGCTCACCCA CACGGCGGCC TTCAAACCCC TCATGGACCT GGCGTGCGCC
ACTTTCCAGA TGGAGCGTCC CCAGCATGCC GATGTCAACG TCCTGCACGA TGGCCAGATC
CCCATGGCCC TGCGCGTGCG CGCATGGCTC ACCCACACGC AGGACGCCCC GGACGACTCT
CCGGGGGAGC CGCTGTGCGT GATGTTCCTG CACGACCTGC GCGAAATGGA AGCGCGCCTG
CGCACCGAGA AGCTGGCCGC CATGGGGCGC ATGTCGGCCG CCGTGGCACA TGAGATCCGC
AACCCGCTGG CAGCGATCGT GCAGGCCAAC GAACTGCTGG AAGAAGACCT GGACGACCCC
ACACAGAAGC GCCTGACACA CATGGTGCGT CAAAACGCCG ACCGGCTGGT GCGCATCACG
GAGGACGTAC TGGACATCGC GCGCGTGCAG CACCAGATCC ACCAGGCCAG CTCCTCCACC
GTGGCACTGG ATGCCATGGT GCAGCAGGTG TGGAACGACT GGACGGCGCA GGACCCCGCA
CGCCGCCAGG GGCAACTGAT ACTGGACGCG GGCTCGGCGC AGGTGGAGTT CGACGCCGAG
CACCTGCGGC GTGTGCTAGT GAACCTGCTG GACAACGCAT TGCGCTACAA GGGACCCGAA
CCCGATTCGC TGTGCCTCGC GACGCGCGCC ACCCCCGGCG GGAAGGCCGG CGTGCAGGTG
TGGAGCGATG GCGCACCGCT GGACAAATCG GTGGAGCGGC ATCTGTTCGA GCCTTTCTTC
TCATCCGAAA GCCGCTCCAG CGGGCTGGGC TTGTACATCT GCCGCGAGCT GTGCCAGCGC
CACGGGGCGG CGATCGGCCA TCAGCGCACC ACACGCAGCC TGGCGCGCGG CGAGGTGGCG
GGAAACGCCT TCACTGTGAC CTTCCGCAGC CTTTCGCGCC CTGCAGACAG CGCATCACTG
TTTGACACAA TCGTGGTCTG A
|
|---|
| Protein sequence | MPSKLAAAAS PLPFHRLWNA FLTARVMVAL ALLLLQLLGI ALNQAGEPLL FSICLGYLVA
TVALRVWGHG AVPDPRPGIQ WLPSIGLDLL LVSVLQALQQ SGGLNFTPLF GLPVLMAGVL
GSLTLALATT AGATLLLLAW AWWLGTYGGA GDGTQRYLQA ALTGTGYFIV AYLVHLLAAK
LTSEQQMARR SQMDARTHRA VSALVMQHVA DGVLVLDLHG QVRLANPAAL LMLGHKISGD
SSLTLTHTAA FKPLMDLACA TFQMERPQHA DVNVLHDGQI PMALRVRAWL THTQDAPDDS
PGEPLCVMFL HDLREMEARL RTEKLAAMGR MSAAVAHEIR NPLAAIVQAN ELLEEDLDDP
TQKRLTHMVR QNADRLVRIT EDVLDIARVQ HQIHQASSST VALDAMVQQV WNDWTAQDPA
RRQGQLILDA GSAQVEFDAE HLRRVLVNLL DNALRYKGPE PDSLCLATRA TPGGKAGVQV
WSDGAPLDKS VERHLFEPFF SSESRSSGLG LYICRELCQR HGAAIGHQRT TRSLARGEVA
GNAFTVTFRS LSRPADSASL FDTIVV
|
|---|
| |