| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3626 |
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| Symbol | |
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| ID | 4674678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3831018 |
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| End bp | 3832397 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840659 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_987814 |
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| Protein GI | 121595918 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.348267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCG CACTCACCGA AAAACTCACC CGTCTCGTCA AGGAGATGCG CGGCCAGGCC
CGCATCACCG AAGCCAACGT GCAGGACATG CTGCGCGAGG TGCGCATGGC CCTGCTGGAG
GCCGACGTGG CGCTGCCCGT GGTGCGCGAC TTCATCGCCC GCGTGAAGGA AAAAGCCCTG
GGCCAGGAGG TGCTGGGTAG CCTGAAGCCC GGCCAGGCGC TGGTGGGCAT CGTGAACAAG
GAGCTGGCCG CGACCATGGG CGAGGGCGTG GCGGACATCA ACCTCAACGC GCAGCCGCCG
GCGGTGATCC TGATGGCCGG CCTGCAGGGC GCGGGCAAGA CCACCACCAC GGCCAAGCTG
GCCAAGCACC TGATCGAAAA GCGCAAGAAG AAGGTGCTGA CCGTCTCGGG CGACGTGTAC
CGCCCCGCCG CCATCGAGCA GCTCAAGACC GTGACCAAGC AGGCCGGCGC CGAGTGGTTC
CCCAGCACGC CCGACCAGAA GCCGCGCGAC ATCGCCCTTG GAGCGCTGGA CTACGCCAAG
AAGCACTTCT TCGACGTGCT GCTGGTGGAC ACGGCCGGCC GCCTGGCCAT CGACGAGGTG
CTGATGCAGG AAATCAAGGA CCTGCATGCC GTGCTGAACC CGGTGGAGAC GCTGTTTGTC
GTCGATGCCA TGCAGGGCCA GGACGCGGTG AACACCGCCA AGGCTTTCAA GGAAGCGCTG
CCGCTCACGG GCATCGTGCT CACCAAACTA GACGGTGACT CGCGCGGCGG TGCGGCGCTG
TCGGTGCGCC AGGTGACGGG CGCGCCGATC AAGTTTGCCG GCGTGTCCGA AAAGATCGAC
GGCCTGGAGG TGTTCGACGC CGAGCGCCAC GCGGGCCGCA TCCTGGGCAT GGGCGACATC
GTCGCGCTGG TCGAGCAGGT CACGGCCGGC GTGGACATGG AGGCGGCGCA AAAGCTCGCC
GCCAAGGTCA AGAGCGGCGA CGGGTTCGAT CTGAACGACT TCCTGGCCCA GTTGCAGCAG
ATGAAGCAGA TGGGCGGCCT GTCCAGCCTC ATGGACAAGC TGCCCGCGCA GCTCACGGCC
AAGGCCGGTC AGGTGGACAT GGACAAGGCC GAGCGCGACA TCCGCCGCAA GGAGGGCATC
ATCTGCAGCA TGACGGCGCT GGAGCGCCGC AAGCCCGAGC TCATCAAGGC CACACGCAAG
AAGCGCATCG CCCAGGGCGC CGGCGTGCAG GTGCAGGAGG TCAACCGCCT GCTCAACGAG
TTCGAGCAGA TGCAGGGCAT GATGAAGAAG ATGAAGGGCG GCGGCCTCAT GAAGCTCATG
AAGAAGATGG GCGGCATGAA GGGCGGCCTG CCGGGCATCG GAGGCATGCC GCGGTTCTGA
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| Protein sequence | MASALTEKLT RLVKEMRGQA RITEANVQDM LREVRMALLE ADVALPVVRD FIARVKEKAL
GQEVLGSLKP GQALVGIVNK ELAATMGEGV ADINLNAQPP AVILMAGLQG AGKTTTTAKL
AKHLIEKRKK KVLTVSGDVY RPAAIEQLKT VTKQAGAEWF PSTPDQKPRD IALGALDYAK
KHFFDVLLVD TAGRLAIDEV LMQEIKDLHA VLNPVETLFV VDAMQGQDAV NTAKAFKEAL
PLTGIVLTKL DGDSRGGAAL SVRQVTGAPI KFAGVSEKID GLEVFDAERH AGRILGMGDI
VALVEQVTAG VDMEAAQKLA AKVKSGDGFD LNDFLAQLQQ MKQMGGLSSL MDKLPAQLTA
KAGQVDMDKA ERDIRRKEGI ICSMTALERR KPELIKATRK KRIAQGAGVQ VQEVNRLLNE
FEQMQGMMKK MKGGGLMKLM KKMGGMKGGL PGIGGMPRF
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