| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3608 |
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| Symbol | |
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| ID | 4673723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3810915 |
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| End bp | 3812801 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639840640 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_987796 |
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| Protein GI | 121595900 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.78709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGCG CTACCGATCT ACTGGATGAA CTCAATGCGG TAGACGAGTC CGCCCGCATC
GAAGCCAAGC GTGCCAGCGA CACGGGTAAG TCGGTGATGG AAACGGTCAT CGCCTTTGCC
AACGAGCCCG GTCTGGATGG CGGCTACCTG CTACTGGGCG TGGACTGGGC GATCAACGAC
AAGGGCGATA CCGTGTACCG GCCGGTGGGG TTGCCCGATC CGGACAAGGT GCAGCGTGAT
CTCGCCAGCC AGTGTGCCAG CATGCTCAAC GTCGCTCTGC GGCCAGAGAT GCAGTTGGAG
CAAGTGGGTG GCAAGACGCT GCTGGTGGTG TATGTGCCCG AGGCTGACGT CACTCACAAA
CCCGTCTACA AAAAAGCCAC GGGCCTACCA GGCGGCGCTT ACCGCCGCAT CGGCTCAAGC
GACCAGCGCT GCGTCGATGA AGACCTCTGG GTGTTGCGCG GTGAAAGCCA GCCCTTGCAT
GGCCCTGATT CAAGCATTCT TTCTGATGCC CGCGCCGACG ACTTTGACCC GACCGCGATT
GCCGCGTATC GGCGTGAACG TGCCCGCATC AACCCCCAGG CGGAAGAGCT GGACTATGGC
GACGAAGACA TGCTCGAAGC CCTGGGGGCA CTGAGGCGTG TGGATGGTGC CTTGCAACCC
ACATTGGCTG GCATCGTTTT GTTCGGTAAA CCGCTAGATT TGCGCAGATT GCTGCCCATG
GTGCGTATTG ACTACATACG TGTACCGGGT AACGAATGGG TCGAAGATCC AGAAAATCGC
TTCCAATCCA TCGACATCCG CAAGCCCCTG ATACTGGCAT TGCCGCTCGC CGAAGCCAGC
ATTATTGATG AGCTGCCTAA AGGCTTTCGC CTGCCGGAGG GCCAGCTACA GAGCGTGCAA
GAGCCCATTC TGCCGCGCAA GGTGATCCGC GAAGCCTTGG CCAATGCCGC CATGCACCGC
AACTACACCC TACACAGCCC AACGCAGATC ATTCGCTACA GCAACCGCAT CGAAATTCGT
AACGTCGGCT ACTCCCTCAA GGAGCCAGCG CAGCTGGGCT TGCCAGGTTC ACGTCTGCGC
AACCCAGCCA TTGCAGCGGT GCTGCATGAT CTGCATCTGG CCGAAGCCAA GGGTACGGGG
ATTCGTGCCA TGCGTCGCCT GGCTGCGGAT GCAGGCTTGC CGCTGCCAGA GTTCCACTCA
GACCGGCAGG CCAATGAATT TAAGCTCACC CTGTTTCTGC ACAACCTGCT CACCGAAGAA
GACCACACCT GGCTGCGCAA TTATGCCGGC AGCACACTGG GCCCCGACGA AGCCAAGGTG
CTGATCTATG TGCGGGCAAC CGGCGCGGTG GATAACACCG CCTGCCGCGA CTTCTGTGGC
TCGGATACCC TGGCCGCCAG CATGGTACTG CGCCGGCTGC GCGACCGGGG CCTGCTTGAG
AAGCGGGGTG CAGGCAGTCG CACCTATTAC ACCCTGGCCG GTAATGAGCC TCGTCCGACT
CTGGAGAGCG CACAGTCAGA GCTGCCGCTG GATCTCCCAG CATTCACCGC TCCTGTTGGC
CAGCCTCAGC CTGCAGAGGC GGTAGCGGGC CAGCAAGCAT GCAACCCCCA GCTTGCAACC
TTGCCGCCTG AGCTTGCAAC CTTACTTGCA ACCTTGCAGG GCCGGATCAG CAGCGAAGCC
TTGCGTGACG GCATCCGCCG CCTGTGTCAG TGGGCGCCCC AGAGCGGCGA TCAACTTGCA
ACCTTGCTGG GAAAAGACCG CGACTACCTG CGTAACAAGC ATCTGATCCC CATGGTGCGT
GACGGCCAAT TACGTTTCCG CTACCCGGAA AGCGCCAAAC ATCCACACCA GGCGTATGTT
GCCCCAGAGG ACAAGAGTAA TGATTGA
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| Protein sequence | MRSATDLLDE LNAVDESARI EAKRASDTGK SVMETVIAFA NEPGLDGGYL LLGVDWAIND
KGDTVYRPVG LPDPDKVQRD LASQCASMLN VALRPEMQLE QVGGKTLLVV YVPEADVTHK
PVYKKATGLP GGAYRRIGSS DQRCVDEDLW VLRGESQPLH GPDSSILSDA RADDFDPTAI
AAYRRERARI NPQAEELDYG DEDMLEALGA LRRVDGALQP TLAGIVLFGK PLDLRRLLPM
VRIDYIRVPG NEWVEDPENR FQSIDIRKPL ILALPLAEAS IIDELPKGFR LPEGQLQSVQ
EPILPRKVIR EALANAAMHR NYTLHSPTQI IRYSNRIEIR NVGYSLKEPA QLGLPGSRLR
NPAIAAVLHD LHLAEAKGTG IRAMRRLAAD AGLPLPEFHS DRQANEFKLT LFLHNLLTEE
DHTWLRNYAG STLGPDEAKV LIYVRATGAV DNTACRDFCG SDTLAASMVL RRLRDRGLLE
KRGAGSRTYY TLAGNEPRPT LESAQSELPL DLPAFTAPVG QPQPAEAVAG QQACNPQLAT
LPPELATLLA TLQGRISSEA LRDGIRRLCQ WAPQSGDQLA TLLGKDRDYL RNKHLIPMVR
DGQLRFRYPE SAKHPHQAYV APEDKSND
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