Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3607 |
Symbol | |
ID | 4673653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3809732 |
End bp | 3810922 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639840639 |
Product | restriction modification system, type I |
Protein accession | YP_987795 |
Protein GI | 121595899 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAA GGGACTTAAA GCCTGGCTGG CGTCGAGTGA AGTTTGGCGA TGTGGTCCGC CAATGCAAAG AGAAGGCCGA TCCCGAGACC TCTGGCCTTG AGCGTTACAT CGCTGGTGAC CATATGGACA CCGACGACCT TCGACTCCGT CGCTGGGGTG AGATTGGCTC GGGTTACTTG GGGCCAGCCT TCCACATGCG CTTCAAGCCC GGACAAGTTC TCTATGGCTC GCGCAGAACC TATCTGCGAA AGGTGGCGGT AGCTGATTTT GAAGGTATCT GTGCGAACAC GACCTTCGTG TTGGAGCCGC AAAACCCCAA TGAACTTCTG CCGGAGTTTC TGCCGTTCCT GATGCAGACT GAGGCATTCA ACGACTTCTC GGTTAAGAAC TCAAAGGGAT CAGTCAATCC CTACATCAAC TTTTCTGATT TGGCGAAGTT TGAGTTTGTA CTGCCACCCA TTGATGAGCA GCAATCAGCC ATAGCCCTAC TAAGCGCCGC AACCGACCAG TGCCATGCCG TCGAAGCTGC ACATCGCGCT GCAGGCCGGA TGCTGCAGTC GTTCAAGGAT TCACTGCTTC TGCGCAAAAC ATCGTCCTTA GCAAATTCCT TTCTCCTGGG CGACCTCTTA TTGAGGTCAC CGGAAAGCGG CTGCAGTGCG CCGCCAAAGG ATGCCGACAC AGGCTATTTC GTACTCGGAT TGGCTGCACT GTCTCGCGAT GGATATGTAT CAGGGGACTT CAAGCCCGTC GAGCCAACAA GCAAGATGGT CGCGGCAAAA CTCTCTATGG GCGACATGCT GATTTCTCGC TCCAATACAG TGGATCGAGT TGGGTTCGTT GGGATTTTCA GCGATAACCG TGATGACGTG TCCTTTCCGG ACACGATGAT GCGCCTCCAG CCAAACCCTG CACTGGTTCA CCCGCATTTC TTGGAGGCCT TGTTACAGAC CACATCTGCC CGCGAATTCC TAATGCGAAT TGCAGCGGGC ACCAGTGCGA GCATGAAGAA GATCAATCGT GCCAACCTGC TGCAGATGCG CTTGAACGTG CCGGATCTTG ATGTCCAGGA AATGGCGCTC GATGAACTGC AGCAATTTAA AAACGCGATT GCAACGCAAA AGGCACGCTG GGATGCCGCG CGGCAGCTAA CAAGACTCAT TGCCATGAGA ACAATTGGGG GAGCGGCATA G
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Protein sequence | MIERDLKPGW RRVKFGDVVR QCKEKADPET SGLERYIAGD HMDTDDLRLR RWGEIGSGYL GPAFHMRFKP GQVLYGSRRT YLRKVAVADF EGICANTTFV LEPQNPNELL PEFLPFLMQT EAFNDFSVKN SKGSVNPYIN FSDLAKFEFV LPPIDEQQSA IALLSAATDQ CHAVEAAHRA AGRMLQSFKD SLLLRKTSSL ANSFLLGDLL LRSPESGCSA PPKDADTGYF VLGLAALSRD GYVSGDFKPV EPTSKMVAAK LSMGDMLISR SNTVDRVGFV GIFSDNRDDV SFPDTMMRLQ PNPALVHPHF LEALLQTTSA REFLMRIAAG TSASMKKINR ANLLQMRLNV PDLDVQEMAL DELQQFKNAI ATQKARWDAA RQLTRLIAMR TIGGAA
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