Gene Ajs_3607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3607 
Symbol 
ID4673653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3809732 
End bp3810922 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content54% 
IMG OID639840639 
Productrestriction modification system, type I 
Protein accessionYP_987795 
Protein GI121595899 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA GGGACTTAAA GCCTGGCTGG CGTCGAGTGA AGTTTGGCGA TGTGGTCCGC 
CAATGCAAAG AGAAGGCCGA TCCCGAGACC TCTGGCCTTG AGCGTTACAT CGCTGGTGAC
CATATGGACA CCGACGACCT TCGACTCCGT CGCTGGGGTG AGATTGGCTC GGGTTACTTG
GGGCCAGCCT TCCACATGCG CTTCAAGCCC GGACAAGTTC TCTATGGCTC GCGCAGAACC
TATCTGCGAA AGGTGGCGGT AGCTGATTTT GAAGGTATCT GTGCGAACAC GACCTTCGTG
TTGGAGCCGC AAAACCCCAA TGAACTTCTG CCGGAGTTTC TGCCGTTCCT GATGCAGACT
GAGGCATTCA ACGACTTCTC GGTTAAGAAC TCAAAGGGAT CAGTCAATCC CTACATCAAC
TTTTCTGATT TGGCGAAGTT TGAGTTTGTA CTGCCACCCA TTGATGAGCA GCAATCAGCC
ATAGCCCTAC TAAGCGCCGC AACCGACCAG TGCCATGCCG TCGAAGCTGC ACATCGCGCT
GCAGGCCGGA TGCTGCAGTC GTTCAAGGAT TCACTGCTTC TGCGCAAAAC ATCGTCCTTA
GCAAATTCCT TTCTCCTGGG CGACCTCTTA TTGAGGTCAC CGGAAAGCGG CTGCAGTGCG
CCGCCAAAGG ATGCCGACAC AGGCTATTTC GTACTCGGAT TGGCTGCACT GTCTCGCGAT
GGATATGTAT CAGGGGACTT CAAGCCCGTC GAGCCAACAA GCAAGATGGT CGCGGCAAAA
CTCTCTATGG GCGACATGCT GATTTCTCGC TCCAATACAG TGGATCGAGT TGGGTTCGTT
GGGATTTTCA GCGATAACCG TGATGACGTG TCCTTTCCGG ACACGATGAT GCGCCTCCAG
CCAAACCCTG CACTGGTTCA CCCGCATTTC TTGGAGGCCT TGTTACAGAC CACATCTGCC
CGCGAATTCC TAATGCGAAT TGCAGCGGGC ACCAGTGCGA GCATGAAGAA GATCAATCGT
GCCAACCTGC TGCAGATGCG CTTGAACGTG CCGGATCTTG ATGTCCAGGA AATGGCGCTC
GATGAACTGC AGCAATTTAA AAACGCGATT GCAACGCAAA AGGCACGCTG GGATGCCGCG
CGGCAGCTAA CAAGACTCAT TGCCATGAGA ACAATTGGGG GAGCGGCATA G
 
Protein sequence
MIERDLKPGW RRVKFGDVVR QCKEKADPET SGLERYIAGD HMDTDDLRLR RWGEIGSGYL 
GPAFHMRFKP GQVLYGSRRT YLRKVAVADF EGICANTTFV LEPQNPNELL PEFLPFLMQT
EAFNDFSVKN SKGSVNPYIN FSDLAKFEFV LPPIDEQQSA IALLSAATDQ CHAVEAAHRA
AGRMLQSFKD SLLLRKTSSL ANSFLLGDLL LRSPESGCSA PPKDADTGYF VLGLAALSRD
GYVSGDFKPV EPTSKMVAAK LSMGDMLISR SNTVDRVGFV GIFSDNRDDV SFPDTMMRLQ
PNPALVHPHF LEALLQTTSA REFLMRIAAG TSASMKKINR ANLLQMRLNV PDLDVQEMAL
DELQQFKNAI ATQKARWDAA RQLTRLIAMR TIGGAA