| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3588 |
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| Symbol | |
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| ID | 4673031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3785361 |
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| End bp | 3786536 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639840620 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_987776 |
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| Protein GI | 121595880 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.252568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.492905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGACGCT TGGCCGATGA CGGTCAATCC CTGCTCTTCG AATATTCTCC CGAGGCCTTG
TCTCAAGGCT TGGAACTGTC GCCCTTGCAC CTCAAGCTGC GTGCGGATGC CTACGGAGGT
TTTCCGATCC ATTTGCATCG CCTTCCGGGC CTGATCGCCG ATAGTCTGCC TGACGGCTGG
GGTTTGCTGC TGATGGATCG GTTGTTCCGT CAACACGGCT TGCGCCATCC CGGGCCACTG
GACCGGCTGG CCTTCATTGG TGAGCGCGCG ATGGGCGCGT TGCGCTTCGT TCCGGCAAGC
GACGCCGGCG CCCACGAGCC CGACTGGTCC TTGCTGGCGC TGGCCGAGCA AAGCCGTCTC
GCGCTCGCGG GCGAGGCGGG GGCAGCCCTG CGCGAGCTCG CGCTCACCGG CGGCTCACCG
CAAGGGGCTC GCCCCAAGGC CTTGGTGCAG TACGACGCAA TGACCGGGCA AGTCAGCACC
CGTCCGGATG CGCCCGGCAG TCCCTGGCTG GTCAAGTTCC CGGCGCAGAA CGAACACAAA
GAGGTTTGCG TCATCGAGCA GCTCTATGCC GAGTTGGCTC GGGACTGCGG ACTGGATGTG
CCCGAAAGTC GTTGGTTCGA CCTTGGCCCC GAACTGGCCG CCTTCGGCGT CGCGCGCTTC
GACCGGGAGG GAGGGCAACG CGTCCCGGTG CACAGTCTGG CTGGATTGTT GCAAGTGGAT
TTTCGCCTGC CCGGTGCCAC CGACTATACC GCCTTCCTGC GGGCTACCCG TTTCCTGACG
CGCGACGAGC GCGAAGTGGA GAAAGCCTAC GCACGAGCCG TCTTCAATGT GCTTTTCCAC
AACCGTGACG ACCATCCCAA GAATTTCGCG TGGCGTCTCG GGCCTGACCG GCGCTGGCGT
CTGGCTCCGG CATTCGACCT GACCTTCAGC GAAGGCCCGA TGGGCCAGCA TCACCTGGAC
GTTTGCGGCG AAGGTGCTGC CATCGAACGC CGGCATTTAT TGCGTCTGGC GGAGGAAGGT
GGCGTCCCAA GGAAACGGGC GGAAGAGGTC ATCGAACGGA TGTTGCTGCA GGCAAGCTCA
TTGGGTGAGC GGTTGGAGCG TGCGCCGATC AGGCAGATGC TGGCGCAACA GATAAAATCC
AGTATTGATG CCTGTCGCCG GCGTCTGGAA AGCTGA
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| Protein sequence | MGRLADDGQS LLFEYSPEAL SQGLELSPLH LKLRADAYGG FPIHLHRLPG LIADSLPDGW
GLLLMDRLFR QHGLRHPGPL DRLAFIGERA MGALRFVPAS DAGAHEPDWS LLALAEQSRL
ALAGEAGAAL RELALTGGSP QGARPKALVQ YDAMTGQVST RPDAPGSPWL VKFPAQNEHK
EVCVIEQLYA ELARDCGLDV PESRWFDLGP ELAAFGVARF DREGGQRVPV HSLAGLLQVD
FRLPGATDYT AFLRATRFLT RDEREVEKAY ARAVFNVLFH NRDDHPKNFA WRLGPDRRWR
LAPAFDLTFS EGPMGQHHLD VCGEGAAIER RHLLRLAEEG GVPRKRAEEV IERMLLQASS
LGERLERAPI RQMLAQQIKS SIDACRRRLE S
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