Gene Ajs_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3571 
Symbol 
ID4672041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3764893 
End bp3765426 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content71% 
IMG OID639840603 
Productphosphoribosyltransferase 
Protein accessionYP_987759 
Protein GI121595863 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.454533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG CTACGACCCC GCCGGGTGCC ACGCGCCCGG GCCATCTCAC GCTGGATGCC 
GAGGCGCTGT ACGCCGAGCT GCTGCGCGGC GTGCGCATGC TGCGCGAATC TGACACCTAC
TTGGCGGGCA TCGCCTCGGG CGGTGCTTGG CTGGCCGAGC GTCTGCAAAA GGACCTGGGC
TTGCCGGGCC AGGCCGGGGT GCTGTCGTCC GCCATGCACC GCGACGATTT CTCCCAGCGG
GGCCTGGCCT CCAGCGCGCA GACCACGCTG CCGTTCGACG TGAATGGTGC GGACATCCTG
GTGCTGGACG ATGTGCTCTA CACCGGCCGC ACCATCCGCG CCGTACTCAA TGAGCTGTTC
GACTACGGCC GCCCGGCGCG CGTGCGCCTG GCGGTGCTGG TGGACCGCGG CGGCCGCGAG
CTGCCGGTGG CCGCCGAGTT CGCTGCGGCG CGCGTGGCGC TGCCGCCCAC GCAATCGCTG
GCACTGGCCC GCAGCGAGGC CGGCGCTTTC CATTTCGACG TCAAAGAGGT CTGA
 
Protein sequence
MSSATTPPGA TRPGHLTLDA EALYAELLRG VRMLRESDTY LAGIASGGAW LAERLQKDLG 
LPGQAGVLSS AMHRDDFSQR GLASSAQTTL PFDVNGADIL VLDDVLYTGR TIRAVLNELF
DYGRPARVRL AVLVDRGGRE LPVAAEFAAA RVALPPTQSL ALARSEAGAF HFDVKEV