Gene Ajs_3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3559 
Symbol 
ID4671803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3746937 
End bp3748124 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content63% 
IMG OID639840590 
Producthypothetical protein 
Protein accessionYP_987747 
Protein GI121595851 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.306765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.452046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCG ACTTCTTCTA CACCCTGCGC GCCGGCAAGC TGCCGGTGTC CGTGAAGGAA 
TTCCTCACGC TGCTGGAGGC GCTGCAGGCC GGCGTGGTCG GCCCCAAGTC CGACGACGCC
TGGAGCCTGG ACGACTTCTA CTACCTCGCG CGCACCGCGC TGGTGAAGGA CGAGAAGCAC
TTCGACAAGT TCGACCGCGC GTTCGCTGCC TACTTCAAGG GCGTGGAGAT GCTGGCCGAC
TTCCGCAAGG AGATCCCCGC CGACTGGCTG CGCAAGATGC TGGAGCGCGA GCTGACGCCC
GAGCAGAAGG CCGCCATCGA GAAGATGGGC TGGGACGAGC TGATGGAGAC GCTCAGGAAG
CGCCTGGAGG AGCAAAAGGA GCGCCACGAA GGCGGCAACA AGTGGATCGG CACGGGCGGT
ACCAGCCCCT TCGGCCACGG CGGCTACAAC CCGCAGGGCA TCCGCATCGG CGGCGCGGGC
AAGAACAAGA GCGCCGTGAA GGTGTGGGAG CAGCGCGCCT ACCGCGACTA CGACGACACG
CAGGAGCTGG GCACGCGCAA CATCAAGGTG GCGCTGCGCC GCCTGCGCAA GTTCGCGCGC
GAGGGGCATG AGCTGGAGCT GGACCTGCCG GACACCATCC GCGCCACGGC GGCCAACGCG
GGCTGGCTGG ACATCAAGAT GGTGCCCGAG CGCCACAACA ACGTGAAGGT GCTGCTGCTG
ATGGACGTGG GCGGCACCAT GGACGAGCAC ATCCAGCGCG TGGAGGAACT CTTTTCTGCC
GTGAAGAGCG AGTTCAAGCA CCTGGAGTTC TACTACTTCC ACAACTGCGT TTACGACTTC
ATGTGGAAGA ACAACCGCCG CCGCTTTGCC GAGAAGTTCC CAACCTGGGA CATCATCCGC
AAGTACAACA AGGACTACAA ACTCATCTTT GTGGGCGACG CCACCATGAG CCCGTACGAG
ATCCTGCAGC CCGGCGGCAG CGTGGAATAC AACAACGAGG AGCCCGGCGC CGAGTGGTTG
CAGCGCCTCA CGCACGCCTT CCCCCGGTTC GCGTGGATCA ACCCCGAACC CCAGGGCGTG
TGGCAGTACC GCCAGAGCAT TGGCATCATC CAGCAGCTCA TGGGCAACCG CATGTACCCT
TTGTCACTCA AAGGCCTCGA AGAAACGATG CGGCTTTTGT CAAAATAG
 
Protein sequence
MLIDFFYTLR AGKLPVSVKE FLTLLEALQA GVVGPKSDDA WSLDDFYYLA RTALVKDEKH 
FDKFDRAFAA YFKGVEMLAD FRKEIPADWL RKMLERELTP EQKAAIEKMG WDELMETLRK
RLEEQKERHE GGNKWIGTGG TSPFGHGGYN PQGIRIGGAG KNKSAVKVWE QRAYRDYDDT
QELGTRNIKV ALRRLRKFAR EGHELELDLP DTIRATAANA GWLDIKMVPE RHNNVKVLLL
MDVGGTMDEH IQRVEELFSA VKSEFKHLEF YYFHNCVYDF MWKNNRRRFA EKFPTWDIIR
KYNKDYKLIF VGDATMSPYE ILQPGGSVEY NNEEPGAEWL QRLTHAFPRF AWINPEPQGV
WQYRQSIGII QQLMGNRMYP LSLKGLEETM RLLSK