Gene Ajs_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3554 
Symbol 
ID4671667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3743084 
End bp3743986 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content72% 
IMG OID639840585 
ProductUspA domain-containing protein 
Protein accessionYP_987742 
Protein GI121595846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.125802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTC AGACCATTGT GGCCCTCACC GATTTCTCGA CCGCGGCGGA GCATGCGCTT 
GACCGTGCCG CGCTGTTGGC TGCCGAGCAC AAGGCGCGCC TGCATCTTCT GTTCGGTGCG
GAGCAGCCGG ACCCGAAGTT CGTCGACCCG CAGGCGCGGC TGGAGCAGCG CGCGCGCCAA
CTGGCGCGCC GCCACGACCT GCCGGTCAAG GCCCTGGCGT ACCGCGGCGC CGGCGTGGTG
GATGAGGTCT TGCGCGCGGC CGTGGGCGCC GACCTGCTGG TGCTGGACAA GCGCGCGCAC
CAGGGCGTGG AGCAGTTGTG GCGCGGTGGC ACGTTGAGCC AGATCCTGCG GCGCAGTCCG
TGCCCCGTGC TGGTGGTGCA GCGTGCGGCG CGCGAGGCTT ATGCGCATGT GCTGCTGGCC
GTGGATTTTT CGCCGGCGGC CGATGCCATG GTGCGCTACG CGAGCGGGCT GGACACTGCC
GCTGCGGTGG AGCTGTTCCA TGCCGTAGAC CTGCGCGATG AGGCCAAGCT GCGCAGTGCC
GAGGCATCGG CCCAGGCCGT GCGCGCGTGG CGCGCGCAAA TGCAGCGGCA TGCGCACGAC
CGGCTGGTGC GGCTGTCCGA TGCCTTCGAG GCGCGGCGCA ATCGTGTGGG AATGACCGTC
GGCATGGGCG ATGTGGCGCG GCAGGTGGCC GTGCAGCAGG AGCGCTCGGG CGCGGAGCTG
GTGGCGCTGA CGCACCGGCG CCGGGGATGG ATGCTGGATC TGCTGCTGGG CAGCGTAGCC
CAGCGGCTGC TGGGGGGTGT GGGCTGCGAC GTGCTGGTGT ACCCGCACGA CTACGCTGGC
GCCGCACCGC GCGGCACCAC GTCTCAGCCC CGCGTGGCGC GCCGCTGGAC GCAGGCGATA
TAG
 
Protein sequence
MRLQTIVALT DFSTAAEHAL DRAALLAAEH KARLHLLFGA EQPDPKFVDP QARLEQRARQ 
LARRHDLPVK ALAYRGAGVV DEVLRAAVGA DLLVLDKRAH QGVEQLWRGG TLSQILRRSP
CPVLVVQRAA REAYAHVLLA VDFSPAADAM VRYASGLDTA AAVELFHAVD LRDEAKLRSA
EASAQAVRAW RAQMQRHAHD RLVRLSDAFE ARRNRVGMTV GMGDVARQVA VQQERSGAEL
VALTHRRRGW MLDLLLGSVA QRLLGGVGCD VLVYPHDYAG AAPRGTTSQP RVARRWTQAI