Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3554 |
Symbol | |
ID | 4671667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3743084 |
End bp | 3743986 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639840585 |
Product | UspA domain-containing protein |
Protein accession | YP_987742 |
Protein GI | 121595846 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.125802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCTTC AGACCATTGT GGCCCTCACC GATTTCTCGA CCGCGGCGGA GCATGCGCTT GACCGTGCCG CGCTGTTGGC TGCCGAGCAC AAGGCGCGCC TGCATCTTCT GTTCGGTGCG GAGCAGCCGG ACCCGAAGTT CGTCGACCCG CAGGCGCGGC TGGAGCAGCG CGCGCGCCAA CTGGCGCGCC GCCACGACCT GCCGGTCAAG GCCCTGGCGT ACCGCGGCGC CGGCGTGGTG GATGAGGTCT TGCGCGCGGC CGTGGGCGCC GACCTGCTGG TGCTGGACAA GCGCGCGCAC CAGGGCGTGG AGCAGTTGTG GCGCGGTGGC ACGTTGAGCC AGATCCTGCG GCGCAGTCCG TGCCCCGTGC TGGTGGTGCA GCGTGCGGCG CGCGAGGCTT ATGCGCATGT GCTGCTGGCC GTGGATTTTT CGCCGGCGGC CGATGCCATG GTGCGCTACG CGAGCGGGCT GGACACTGCC GCTGCGGTGG AGCTGTTCCA TGCCGTAGAC CTGCGCGATG AGGCCAAGCT GCGCAGTGCC GAGGCATCGG CCCAGGCCGT GCGCGCGTGG CGCGCGCAAA TGCAGCGGCA TGCGCACGAC CGGCTGGTGC GGCTGTCCGA TGCCTTCGAG GCGCGGCGCA ATCGTGTGGG AATGACCGTC GGCATGGGCG ATGTGGCGCG GCAGGTGGCC GTGCAGCAGG AGCGCTCGGG CGCGGAGCTG GTGGCGCTGA CGCACCGGCG CCGGGGATGG ATGCTGGATC TGCTGCTGGG CAGCGTAGCC CAGCGGCTGC TGGGGGGTGT GGGCTGCGAC GTGCTGGTGT ACCCGCACGA CTACGCTGGC GCCGCACCGC GCGGCACCAC GTCTCAGCCC CGCGTGGCGC GCCGCTGGAC GCAGGCGATA TAG
|
Protein sequence | MRLQTIVALT DFSTAAEHAL DRAALLAAEH KARLHLLFGA EQPDPKFVDP QARLEQRARQ LARRHDLPVK ALAYRGAGVV DEVLRAAVGA DLLVLDKRAH QGVEQLWRGG TLSQILRRSP CPVLVVQRAA REAYAHVLLA VDFSPAADAM VRYASGLDTA AAVELFHAVD LRDEAKLRSA EASAQAVRAW RAQMQRHAHD RLVRLSDAFE ARRNRVGMTV GMGDVARQVA VQQERSGAEL VALTHRRRGW MLDLLLGSVA QRLLGGVGCD VLVYPHDYAG AAPRGTTSQP RVARRWTQAI
|
| |