Gene Ajs_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3549 
Symbol 
ID4674193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3739955 
End bp3740608 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID639840581 
Productbutyryl-CoA:acetate CoA transferase 
Protein accessionYP_987738 
Protein GI121595842 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.427569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGCT ATCAAAAACG AACCAAGGAC GAACTGGCCG CCCGAGTGGC CCAGGACATC 
TTCGACGGTG CCTATGTGAA CCTGGGCATC GGCCAGCCGA CCCTGGTGGC CAACCACATC
CCCGCAGGCC GCGAGGTGGT GCTGCATTCC GAGAACGGCA TCCTGGGCAT GGGCCCCGCG
CCCGCCAAGG GTCAGGAGGA CTATGACCTG ACCAACGCCG GCAAGCAGCC CGTGACGCTG
CTGCCCGGTG GCTGCTACTT CCACCATGCC GACAGCTTCG CCATGATGCG CGGCGGCCAC
CTGGACATCT GCGTGCTGGG CGCCTTCCAG GTGTCGGCCA CGGGCGACCT GGCCAACTGG
AGCACCGGCG AGCCCGGCGC CATTCCCGCC GTGGGCGGCG CCATGGACCT GGCCGTGGGC
GCCAAGTCCA CCTGGGTGAT GATGGATCTG GTCAGCAAGA CCGGCGAATG CAAGGTGGTT
CAGGCCTGCA GCTACCCCCT GACGGGCCTG GCCTGCGTCA AGCGCATCTA CACCGACCTG
TGCACGCTGG AATGCACGCC CCAGGGCCTG CGCCTGATCG ACACCGTGCC CGGCCTCTCG
CACGAGGAGC TGGAGCGCAT CGTCGGCCTG CGGATCCAGC CCCCACAGCA ATAA
 
Protein sequence
MSSYQKRTKD ELAARVAQDI FDGAYVNLGI GQPTLVANHI PAGREVVLHS ENGILGMGPA 
PAKGQEDYDL TNAGKQPVTL LPGGCYFHHA DSFAMMRGGH LDICVLGAFQ VSATGDLANW
STGEPGAIPA VGGAMDLAVG AKSTWVMMDL VSKTGECKVV QACSYPLTGL ACVKRIYTDL
CTLECTPQGL RLIDTVPGLS HEELERIVGL RIQPPQQ