| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3541 |
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| Symbol | |
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| ID | 4671130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3731927 |
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| End bp | 3732496 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639840573 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_987730 |
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| Protein GI | 121595834 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.675577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGCCG GTATACGATT CATTACCATC TGCCGCCTCA TCCGTCAGCC CGCCGCGTGC
GGGCCGCCGA CAATAGCCAC CATGTTTCAC ATCGTCCTCG TCGAGCCTGA GATTCCGCCC
AACACCGGCA ACGTGATCCG CCTGGCCGCC AATACCGGCT GCATGCTGCA TCTGGTGGAA
CCGCTGGGCT TCTCCATGGA AGACCCTCTC ATGCGCCGCG CGGGACTGGA CTACCACGAG
TACGCCGAGG TGCGCCGCCA CCCGGGCTGG ACGGCCCTGC TGCGCGACAT GCAGCCCGAC
CTGTCGCGCA TGTTCGCGCT GACCACCCAT GGCACGCAGT CGGTGTACGA CACGGGCTTC
CTGCCGGGCG ACTGGTTCGT GTTCGGCGCC GAATCGCGCG GCCTGCCGCC GGAACTGCGC
GAGACGTTCC CCCCCGCGCA GCGCCTGCGC CTGCCGATGC TGCCCAACCA GCGCAGCCTG
AATCTGTCCA ACGCCGTGGC CGTGACGGTC TACGAGGCGT GGCGGCAAAA CAGCTTTCTC
ACTCCGCCCA CGCAGCCCCA GCCTGCCTGA
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| Protein sequence | MAAGIRFITI CRLIRQPAAC GPPTIATMFH IVLVEPEIPP NTGNVIRLAA NTGCMLHLVE
PLGFSMEDPL MRRAGLDYHE YAEVRRHPGW TALLRDMQPD LSRMFALTTH GTQSVYDTGF
LPGDWFVFGA ESRGLPPELR ETFPPAQRLR LPMLPNQRSL NLSNAVAVTV YEAWRQNSFL
TPPTQPQPA
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