Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3527 |
Symbol | |
ID | 4670879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3721077 |
End bp | 3721997 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639840559 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_987716 |
Protein GI | 121595820 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.153236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG CTCCTGCTCC CGCCCCCGCC GCCGCAGCGC CGCGCGCTCT GCCGTCGCGG CTGTCCCAGT TCTACGCGTT GACCAAGCCG CGTGTGGTGC AGCTCATCGT GTTCTGCGCC TTCATCGGCA TGGTGCTGGC CGTGCCGGGC ATGCCCAGCG GCGCGCAGTG GGCGTTGATG GCCGTGGCCA GCGCGGGCAT CTGGCTCGTG GCCGGTGCGG CGGCGGCGTT CAACTGCATC GTGGAGCAGG GCATCGACGC CAAGATGAAG CGCACGGCCT GGCGCCCCAC CGCCAAGGGC GAGCTGTCCA ACACGCAGAC GCTGCTGTTC TCGGCGCTGC TGTGCGCGGC GGGCTCGGCG CTGCTGTACT GGTGGGTGAA CCCGCTGACC ATGTGGCTGA CCTTCGCCAC GTTTGTCGGC TATGCGGTGA TCTACACGGT GATCCTCAAG CCGCTCACGC CGCAGAACAT CGTGATCGGC GGCGCCAGCG GCGCCATGCC GCCCGTGCTG GGCTGGGCCG CGATGACCGG CGAGGTGGGC CCCGAGGCAC TGATCCTGTT CCTCATCATT TTCCTGTGGA CGCCGCCGCA CTTCTGGGCA CTGGCGCTGT ACCGCGTGGA GGACTATCGC AAGTCCGGCC TGCCCATGCT GCCCGTCACC CACGGCAACG AGTTCACGCG CCTGCAGGTG TTTCTCTATA CCTTGATCCT GTTCGCAGGC TGCCTCATGC CTTTCGTGTA CGGTATGAGT TCGTGGATCT ACCTTGCAGC CGCCGTGGTG CTGAGCGCGG GCTTTTGCCT GTACGGCTTC CGGCTGTGGC GCGACTACTC CGACACGCTG GCGCGCAAGA CCTTTCGTTT CTCGCTGATC CACCTGAGCC TGCTGTTCGC GGCGCTGCTG GTGGACCACT ACCTCCTGTG A
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Protein sequence | MSAAPAPAPA AAAPRALPSR LSQFYALTKP RVVQLIVFCA FIGMVLAVPG MPSGAQWALM AVASAGIWLV AGAAAAFNCI VEQGIDAKMK RTAWRPTAKG ELSNTQTLLF SALLCAAGSA LLYWWVNPLT MWLTFATFVG YAVIYTVILK PLTPQNIVIG GASGAMPPVL GWAAMTGEVG PEALILFLII FLWTPPHFWA LALYRVEDYR KSGLPMLPVT HGNEFTRLQV FLYTLILFAG CLMPFVYGMS SWIYLAAAVV LSAGFCLYGF RLWRDYSDTL ARKTFRFSLI HLSLLFAALL VDHYLL
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