Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3522 |
Symbol | |
ID | 4670594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3715281 |
End bp | 3716246 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639840554 |
Product | RNA polymerase, sigma 32 subunit, RpoH |
Protein accession | YP_987711 |
Protein GI | 121595815 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTGCA TGGAAGAAAG GACTACCGAT ATGGCACTCC AGACTGCAAC CTCCGTGACG ACCCTCGCGC CCGCGAACCC GTGGGCGCTG GTTCCCCCGC TGGGCAACCT GGACGCCTAT ATCTCCGCCG TCAACCGCCT TCCCCTGCTC ACGCAGGAGG AGGAGCAGCG CTACGCGCGC CAGCTCAAGG ATGACAACAA TGTCGAGGCG GCCGGCCGCC TGGTGCTGTC GCACCTGCGC CTGGTCGTGT CCATCTCGCG CCAGTACCTG GGTTACGGCC TGCCGCATGG CGATCTGATC CAGGAAGGCA ACGTGGGCCT GATGAAGGCC GTCAAGCGCT TTGACCCTGA CCAGGGCGTT CGCCTGGTGA GCTACGCCAT GCATTGGATC AAGGCCGAGA TCCACGAGTA CATCCTGAAG AACTGGCGCA TGGTCAAGGT GGCAACGACC AAGGCGCAGC GCAAGCTGTT CTTCAACCTG CGCTCCATGA AGCAGGGCTT CAAGGCCGAC GCGCTGGACG CCGACACGCA CCGCGAAACC TTATCCGACC ACGAGATCGA CCTGGTGGCC GAGCAGCTCA ACGTGAAGCG CGAGGAAGTC ATCGAGATGG AAACGCGCCT GTCCGGTGGC GACGTGCTGC TGGACCCCGC TCCCAGCGAC GACGGCGAGC AGGCCTTTGG CCCCATCGCC TACCTCGCCG ACGCGGGCCA TGAGCCCACC GCCTTGATCG AATCGCGCCA GCGTGACGCG CTGGCCACGG ACGGTATTGC CACCGCCCTG GACAGCCTGG ACGCACGCAG CCGCCGTATC GTGGAGCAGC GCTGGCTGCA GGTGAACGAC GATGGCTCGG GCGGCATGAC ACTGCACGAG TTGGCGACCG AGTACGGCGT GAGCGCGGAG CGCATCCGCC AGATCGAGGT GGCCGCCATG AAAAAGATGA AGAAGGCCCT GGCCGAATAC GCCTGA
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Protein sequence | MICMEERTTD MALQTATSVT TLAPANPWAL VPPLGNLDAY ISAVNRLPLL TQEEEQRYAR QLKDDNNVEA AGRLVLSHLR LVVSISRQYL GYGLPHGDLI QEGNVGLMKA VKRFDPDQGV RLVSYAMHWI KAEIHEYILK NWRMVKVATT KAQRKLFFNL RSMKQGFKAD ALDADTHRET LSDHEIDLVA EQLNVKREEV IEMETRLSGG DVLLDPAPSD DGEQAFGPIA YLADAGHEPT ALIESRQRDA LATDGIATAL DSLDARSRRI VEQRWLQVND DGSGGMTLHE LATEYGVSAE RIRQIEVAAM KKMKKALAEY A
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