| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3519 |
|---|
| Symbol | |
|---|
| ID | 4670532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3712075 |
|---|
| End bp | 3713529 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639840551 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_987708 |
|---|
| Protein GI | 121595812 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCG CTATCACCCT TGTGGGCCTG CTGGCCTGTC TGCACGCCTG GGCGCAAAAC
CCAGCGCATG AATCCCCACC TGCTGCGTCT GCCGCGGCGG CGCACGCCCA GGCCACCACG
GCCAGCGGTG CGCAGCAATT CACCCTGAAG AACGGCATGC AGCTCATCGT GCAGCCCGAC
CGGCGCGCGC CCACGGCGGT GCACATGGTC TGGCTGCGCG TAGGCGCCAT GGACGAGGTG
GACGGCACCT CGGGCGTGGC GCATGTGCTG GAGCACATGA TGTTCAAGGG CTCGAAGGCC
GTGCCGCCGG GCGAGTTCTC GCGCCGCGTG GCGGCGCTGG GCGGGCAGGA GAACGCCTTC
ACCAGCCGCG ACTACACCGG CTATTACCAG CAGATACCGG CCGACCGGCT GGCCGACGTG
ATGCAGCTCG AATCCGACCG CTTCGCCCAC AACCAGTGGC CCGACGCGGA GTTCACCAAG
GAGATCGAGG TCGTCAAGGA AGAGCGCCGC ATGCGTACCG AGGACCAGCC GCGCGCCGCG
CTCATCGAGC AGCTGTTCGC CTCCACCTTC ATCGCTTCGC CCTACCGCCG CCCGGTGGTG
GGCTGGATGA GCGACCTGGA CTCCATGACC CCCGACGACG TGCGCCGCTT TTACCGCGAC
TGGTACGTGC CCGGCAATGC CGCCGTGGTG GTGGCGGGTG ACGTGGACCC GGCGCAGGTG
CTGGCCCTGG CGGAGAAGAC CTACGGCACC ATTCCCGCAC GTGCCCTGCC GGCGCGCAAG
CCGCGCACCG AGCCGGCGCA GCAGGGCCTG CGCCGCATCG CCTTCAAGGC GCCGGCCGAG
CAGGCCTACG TGGCGCTGGC CTTCCGCGTG CCGGGTGTCA CGCGCCTGGA CGATATGACC
GATGCCGACC GTGACGGCCT GGCGCTGCTG GTGCTGTCGG CCGTGCTTAG CGGCTACGAC
GGCGCGCGCC TGGAGCGAGC CCTCACGCAG GGTGCGGACC GTGTGGCCGA CGGCGCGGAC
AGCCAGGCGT CCATCCTCGG GCGCGGACCG GCGCTGTTTC TCATGACCGG CGTGCCCGCC
GCGGGCAAGA CCTCGGCCCA GGTCGAGGAG GCGCTGCGCG CCGAGGTGGC CCGCGTGGCG
CGCGAGGGCG TGAGCGAGGC CGAGCTCTCG CGCGTGAAAA CGCAGTGGGC GGCCTCCACC
ATCTACGCGC GCGATTCGCT TTACAGCCAG GCCAGCGATC TGGGCAGCAA CTGGGTGCAG
GGCCTGCCGC TGGACGCGGA CGAGCGCATG CTCAAGCTGC TGCGCGCGGT CACGCCGCAG
CAGGTGCAAT CCGTGGCGGC GCGGTACTTC GGCGACGATC AGCTCACCGT TGCCACGCTG
CTGCCCCAGC CCGTGGCGGC AGGCACCAAG CGTGCCGCCC CAGCACCCGA CGCTGCCGGT
GGCCGCGTGC ATTGA
|
|---|
| Protein sequence | MKRAITLVGL LACLHAWAQN PAHESPPAAS AAAAHAQATT ASGAQQFTLK NGMQLIVQPD
RRAPTAVHMV WLRVGAMDEV DGTSGVAHVL EHMMFKGSKA VPPGEFSRRV AALGGQENAF
TSRDYTGYYQ QIPADRLADV MQLESDRFAH NQWPDAEFTK EIEVVKEERR MRTEDQPRAA
LIEQLFASTF IASPYRRPVV GWMSDLDSMT PDDVRRFYRD WYVPGNAAVV VAGDVDPAQV
LALAEKTYGT IPARALPARK PRTEPAQQGL RRIAFKAPAE QAYVALAFRV PGVTRLDDMT
DADRDGLALL VLSAVLSGYD GARLERALTQ GADRVADGAD SQASILGRGP ALFLMTGVPA
AGKTSAQVEE ALRAEVARVA REGVSEAELS RVKTQWAAST IYARDSLYSQ ASDLGSNWVQ
GLPLDADERM LKLLRAVTPQ QVQSVAARYF GDDQLTVATL LPQPVAAGTK RAAPAPDAAG
GRVH
|
|---|
| |