Gene Ajs_3518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3518 
Symbol 
ID4670539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3710677 
End bp3712059 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content70% 
IMG OID639840550 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_987707 
Protein GI121595811 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAA CTCTTAAAAC GATAGCTGCT CGCGCTTTTC TGATAAGCGC TGGAGCCATT 
TTTTATACCC AATCTGCCTG GGCGCTCCTG CCCATCCAGC ACTGGACCGA GCCCAGCGGT
GCGCGCGTGT GGCTGGTGGA AAGCCCGGCC ATTCCCATGG TGGACGTGCA GGTGGACTTC
GATGCCGGCG CGCGCCGCGA CCCTGCGGCC CAGGCGGGCC TGGCCGCGGC GGCCGCGCTC
ATGAGCTCCA AGGGCGTGAC CGCGGGCGGG CCGAACGAGC CCCCGATGGA CGAGAACGAA
CTGGGCGAGG CCTGGGCCGA CCTGGGCGCC AGCTTCGAGG CTGGCGCCGA GCGCGACGGC
CTGGCGTTCT CGCTGCGCTC GCTGACCGAG CCCGACTTGC TGGACCGTGC CGCGCGTCTG
GCCGCGCGCC AGCTGGGCCA GCCCAGCTAT GCACCGGACG TGTGGCAGCG CGAGCGGGCG
CGCTGGAGCG CCGCCATCAA GGAGGCCGAC ACACGCCCCG GCACCGTGGC CAGCAAGGCC
TTCAACGCCG CAGTGTTCGG CGGCCACCCT TACGGCCAGC GCGCCACGGC CGAGACACTG
AACAACATCC AGCCGGCCGA TCTGCAGGCT TTCCATGCCC AGTACCTGCA GGCCTGCCAT
GCGCGGGTGA GCATCGTGGG CGCCCTCACG CGTTCCCAGG CGCAGACGTT GGTGCAGACG
CTGCTGTCGC GCCTGCCTGC GCCCCAGGCC GGGGCCTGCG CGCCGTTGCC ACCCGTGGCC
GAGGTGCAGC CGCTGGCACG CGCCGTGCAG GTGGATGTGC CCTTCGCTTC GGCACAGGCC
CATGTGCTCA TCGGCCAGCC GGGCTTTGTG CGCCGGGATC CGGACTTCCT CGCGTTGCTG
GTGGGCAACC ACATCCTGGG TGGCGGTGGC TTCACCTCGC GCCTGACCAA TGAGGTGCGC
GAGAAGCGCG GCCTTTCCTA CAGCGTGGGC AGCAGCTTCT CGCCTGGCCT GAACGGCGGG
GCCTTCGTCG TCGGCCTGCA GACCCGGCCC GACCAGGCCG CCCAGGCCGT GCAGGTCACG
CGCGACGTGC TCGCGCGCTT CGTGGCCGAA GGACCCACCG AGGCCGAACT GCGCGCCGCC
AAGGACAACC TCGTCGGCGG CTTTGCACTG CGCATCGACA GCAACCGCAA GCTGCTGGCC
AACGTGGTCA ACATCGCCTG GAACGACCTG CCGCTGGACT ACTTAGAGCA CTGGACCGAC
CGCGTGGAGG CCCTCACCGT GGCCGACATC CGCGCCGCCC TGCAGCGCAA GCTGCAGCCC
GAGCGCATGG TGACCGTCAT CGTGGGCGCG CAGCCGGCCG CCACGGCAAA GGCACGGCCA
TGA
 
Protein sequence
MYKTLKTIAA RAFLISAGAI FYTQSAWALL PIQHWTEPSG ARVWLVESPA IPMVDVQVDF 
DAGARRDPAA QAGLAAAAAL MSSKGVTAGG PNEPPMDENE LGEAWADLGA SFEAGAERDG
LAFSLRSLTE PDLLDRAARL AARQLGQPSY APDVWQRERA RWSAAIKEAD TRPGTVASKA
FNAAVFGGHP YGQRATAETL NNIQPADLQA FHAQYLQACH ARVSIVGALT RSQAQTLVQT
LLSRLPAPQA GACAPLPPVA EVQPLARAVQ VDVPFASAQA HVLIGQPGFV RRDPDFLALL
VGNHILGGGG FTSRLTNEVR EKRGLSYSVG SSFSPGLNGG AFVVGLQTRP DQAAQAVQVT
RDVLARFVAE GPTEAELRAA KDNLVGGFAL RIDSNRKLLA NVVNIAWNDL PLDYLEHWTD
RVEALTVADI RAALQRKLQP ERMVTVIVGA QPAATAKARP