| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3498 |
|---|
| Symbol | |
|---|
| ID | 4673246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3695140 |
|---|
| End bp | 3696063 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639840530 |
|---|
| Product | nicotinate-nucleotide pyrophosphorylase [carboxylating] |
|---|
| Protein accession | YP_987687 |
|---|
| Protein GI | 121595791 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.405725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAAGT GCGGCGAGTC TATGCGATGC GGCTATGCTC GCCCCATGAC GACGAGAGAC
TTGTTTGGCG CCGACGCACT CGCGGCGCTG GCCCGTGCCG ATGTGGACCG CGCCCTGCAG
GAAGACGTGG GCAGCGGCGA CCTGACGGCC GGCCTGATCG ACCCCGCGCG CCGCGTGCGT
GCGCGCATCC TGGCGCGCGA AGCCGCCGTG ATCTGCGGCG CTCCTTGGGT CGAGGCTGCG
CTGCGTGCGC TGGACCCCGG CGTGACGCTG AACTGGCATG TGGCCGAGGG CGCGCGCTGC
GCCACCGACC AGGTGGTATT GGAGATCGAA GGCCAGGCGC GCGCGCTGCT GAGCGCCGAG
CGCACGGCGC TCAACTTCCT GCAGCTGCTG TCGGCCGTGG CCACCAAGAC GCGCACCTAT
GTGGATGCCG TGGCCGGCAC CCGCGCCCAC ATCGTGGACA CGCGCAAGAC GCTGCCGGGC
CTGCGCCTGG CGCAGAAGTA CGCCGTGCGC ACGGGCGGTG GCACCAACCA TCGCATCGGC
CTGCACGATG CCGTGCTCAT CAAGGAAAAC CACATCGCTG CCGCCGGCGG CGTGACGGCG
GTGCTGCGGG CCGCCCAGGC GGTGGCTGCG CAGGCTGCAT TCATCGAGAT CGAGGTGGAA
ACGCTGGCGC AGCTGCAGGA GGCGCTCGAT GCGGGCGCGA CGATGGTGCT GCTGGACAAC
ATGCCGCTGG CACAACTGCG CGAGGCCGTG CGCATCAACG CGGCGCATGC GGGCGGGGGC
GCCATCCTGG AGATCTCGGG CGGCGTCACG CTGGAAGGCC TGCGTGCGCT GGCCGAGACG
GGCGTGGACC GCATCTCCAT CGGCACGCTG ACCAAGGATG TGAAGGCCAC GGATTTCTCC
ATGCGCCTGC AGGAATTGGC CTGA
|
|---|
| Protein sequence | MQKCGESMRC GYARPMTTRD LFGADALAAL ARADVDRALQ EDVGSGDLTA GLIDPARRVR
ARILAREAAV ICGAPWVEAA LRALDPGVTL NWHVAEGARC ATDQVVLEIE GQARALLSAE
RTALNFLQLL SAVATKTRTY VDAVAGTRAH IVDTRKTLPG LRLAQKYAVR TGGGTNHRIG
LHDAVLIKEN HIAAAGGVTA VLRAAQAVAA QAAFIEIEVE TLAQLQEALD AGATMVLLDN
MPLAQLREAV RINAAHAGGG AILEISGGVT LEGLRALAET GVDRISIGTL TKDVKATDFS
MRLQELA
|
|---|
| |