Gene Ajs_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3492 
Symbol 
ID4673282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3688427 
End bp3689287 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content66% 
IMG OID639840524 
Productcondensin subunit ScpA 
Protein accessionYP_987681 
Protein GI121595785 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.367211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.705468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCC CGCGTCTCGC CGCGACTGCC GACGACGGTG CGCCGCCGGC CTCTGGCGAC 
GGCCTGCCGC AGGTGGTGGA CCAGGTGGCG CTGGCGCGCC TGTATGGCGA GCCCCTGTTC
GCGCTGCCGC AGGACCTGTA CATCCCCCCC GACGCGCTGG AGGTGTTCCT GGAGGCCTTC
GAAGGCCCGC TGGATCTGCT GCTGTACCTG ATCCGCAAGC AGAACTTCAA CATCCTGGAC
ATCCCCATGC TGGATGTCAC GCGCCAGTAC CTGGGCTACG TGGAGGAGAT CCGCAGCCGC
AACCTGGAGC TGGCGGCCGA GTACCTGCTG ATGGCGGCGA TGCTCATCGA GATCAAGTCG
CGCATGCTGC TGCCGCCCAA GAAGCAGGAA GGCAGCGCCG AGCCCGAGGA CCCGCGCGCC
GAACTGGTAC GCCGCCTGCT GGAGTACGAG CAGATCAAGC TGGCCGCCAT GCGCCTGAAT
CAGGTGCCGC AGTACGGCCG CGACTTCCTC CGCGCGCAGG TCACCATCGA GCAGAGCCTG
CAGCCGCGCT TTCCGGACGT GAGCCTGACC GACCTGCAGG AAGCCTGGCG CGACATCTTG
AAGCGCGCCA AGCTGGTGCA GCACCACAAG ATCACGCGCG AGGAACTCTC GGTGCGCGAA
TACATGAGCC ATGTGCTCAA GGCGCTGCAG GGCCGGCGCT TCGTGGAATT CGAGGAACTG
TTCCAGCCCG AGAAGGGCGG CACCGTGCTC GTGGTGACCT TCATCGCGCT GCTGGAGCTG
GCCAAGGAAA CCCTCATCGA GATCACCCAG GCCGAGGCGT TCGCACCCAT CTACGTGCGC
CTGGCCTATA CGCCTGTCTG A
 
Protein sequence
MAAPRLAATA DDGAPPASGD GLPQVVDQVA LARLYGEPLF ALPQDLYIPP DALEVFLEAF 
EGPLDLLLYL IRKQNFNILD IPMLDVTRQY LGYVEEIRSR NLELAAEYLL MAAMLIEIKS
RMLLPPKKQE GSAEPEDPRA ELVRRLLEYE QIKLAAMRLN QVPQYGRDFL RAQVTIEQSL
QPRFPDVSLT DLQEAWRDIL KRAKLVQHHK ITREELSVRE YMSHVLKALQ GRRFVEFEEL
FQPEKGGTVL VVTFIALLEL AKETLIEITQ AEAFAPIYVR LAYTPV