| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3488 |
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| Symbol | |
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| ID | 4673295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3684878 |
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| End bp | 3686545 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639840520 |
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| Product | hypothetical protein |
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| Protein accession | YP_987677 |
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| Protein GI | 121595781 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.104539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.797665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCG CACAAGCCCT GCTCAAGACC CTGGCCGATG CCGGTATCGA GGTCTGCTTC
ACCAACCCCG GCACGAGCGA GATGCACTTC GTCGCCGCGC TGGACAGCGA GCCGCGCATG
CGCGCCGTGC TGGCGCTGTT CGAGGGCGTG GCCACCGGCG CGGCCGACGG CTACGCGCGC
ATGGCGGGCA AGCCCGCCGC CACGCTGCTG CACCTGGGTT GCGGCCTGGG CAACGGCCTG
GCCAACCTGC ACAACGCACG CAAGGGCAAG GTGCCGGTGG TCAACATCGT GGGCGACCAC
GCCACGTACC ACACGCAGTA CGACGCGCAG CTGCAGTCCG ACATCGAGAC CGTGGCGCGC
AACGTCTCGC CCGGCTTCGT GCGCACCGCG CAAAGCACTG CGGCCCTGTG CCAGGACGCG
GCAGACGCCA TTGCCGCAGC ACGCGGCCTG CCGGGCCAGG TGGCCACGCT GGTCCTGCCC
GCCGACGTGT CGTGGGGCGA GGGCGGCCAG CCCTGCCCGC CCCCGGCGTT GCCCGCGCCC
GCCGCCGCCA GCGACGAGGC GGTGCAGGCC CTGGCTCAGA CCCTCATGCA GGCCATCCGC
CCGGGTGAGA AGACCGTGCT GCTGCTGGGC GGCCACGCGC TGCGCGAGGG GGCGCTGCGC
AGCGCCGCGC GCATTGCGGC CCACAGCGGC GTGCAGTTGC TCGCCGAGGT GTTTCCCACC
CGCATGGAGC GCGGCGCGGG CCTGCCCGCC GTGGAGCGCG TGGCCTACCT GGCCGAGCTG
GCCGGCGTGC AACTGGCGGG CGCGCGGCAC CTGGTGCTGG TCGATGCGAA GTCGCCCGTC
TCGTTCTTCG CCTACCCCGG CAAGGCCAGC GACCTGGTGC CCGCAGGCTG CACGGTGCAC
ACCCTGTGCA GCCCGGCGCA GGACGCGGCG GCAAGCCTGG ACAAGCTGGC CGCCGCGCTG
GGCGCCAGCG CCACGCAGCC GCCCCTGGCC CCGGCGCAGC GCCCCGGCCG CCCGCGCGGG
CCGCTCACCG CGCCCAAAGT GTGCAAGGCC GTGGGCCACC TGCTGCCCGA GAACGCCATC
CTCATCGACG AGGCCATCAC CTCCGGCCTG ATGCTGGGCG TGATGACGGC GGGCTGCCCG
CGCCACGACC TGATCACGCT GACCGGCGGC GCCATCGGCC AGGGCCTGCC CAATGCCGTG
GGCGCGGCCA TCGCCTGCCC CAACCGCCCG GTGATCGCAC TGATCGGCGA CGGCACGGCG
ATGTACACCC TCCAGGCGCT GTGGAGCATG GCGCGTGAGA ACCTGCATGT GGTGTCCGTG
ATCTTCAACA ACGCCAGCTA CTCGGTGCTG AACGTGGAGC TGGAGCGCGT GGGCGCCGAG
CAAGCGGGCC CCAAGGCCAA GTCGCAGCTC GACCTGAAGG GCCCGGTACT CAACTTCGCC
CAGCTCGCGC AGGGCATGGG CGTGCATGCG GTGCGCGCCA GCACGGCCGA GGACTTTTGC
CAGGCGCTGG AATACGCGCT GGCGCACCCC GGGCCGCACC TGATCGAAGC ACTGGTGCCC
GAGTCGCTCG CCGGCCCGAA GCGCAAGGTG CTGCCCTGGC TGCTGCGCGC CCTGCCCAGC
CTGCCGCCGC AGGTGGCGCG CGCGCTCAAG CGCAAGATCG CGCCGTAA
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| Protein sequence | MNGAQALLKT LADAGIEVCF TNPGTSEMHF VAALDSEPRM RAVLALFEGV ATGAADGYAR
MAGKPAATLL HLGCGLGNGL ANLHNARKGK VPVVNIVGDH ATYHTQYDAQ LQSDIETVAR
NVSPGFVRTA QSTAALCQDA ADAIAAARGL PGQVATLVLP ADVSWGEGGQ PCPPPALPAP
AAASDEAVQA LAQTLMQAIR PGEKTVLLLG GHALREGALR SAARIAAHSG VQLLAEVFPT
RMERGAGLPA VERVAYLAEL AGVQLAGARH LVLVDAKSPV SFFAYPGKAS DLVPAGCTVH
TLCSPAQDAA ASLDKLAAAL GASATQPPLA PAQRPGRPRG PLTAPKVCKA VGHLLPENAI
LIDEAITSGL MLGVMTAGCP RHDLITLTGG AIGQGLPNAV GAAIACPNRP VIALIGDGTA
MYTLQALWSM ARENLHVVSV IFNNASYSVL NVELERVGAE QAGPKAKSQL DLKGPVLNFA
QLAQGMGVHA VRASTAEDFC QALEYALAHP GPHLIEALVP ESLAGPKRKV LPWLLRALPS
LPPQVARALK RKIAP
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