Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3480 |
Symbol | |
ID | 4674209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3675295 |
End bp | 3676416 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639840513 |
Product | tRNA 2-selenouridine synthase |
Protein accession | YP_987670 |
Protein GI | 121595774 |
COG category | [R] General function prediction only |
COG ID | [COG2603] Predicted ATPase |
TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.54526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGCCGCG GGCGCGCCGC GCGCATCATC CCAGATTCGC ACCTGCCCGG CTTTGTTCAG CACTGCATTC CCGTGTCCCA CCACCGCCCC ACCCGTCCCG AAGACCGCCA CCAGTTCGAC GCCCTCATCG ACGCGCGCTC GCCCGCCGAA TACGCCGAGG ACCACATCCC CGGCGCGATC AACTGCCCGG TGCTGAACGA CGAGGAGCGC GCCATCGTCG GCACCATCTA CGTGCAGCAA AGCGCCTTCG AGGCGCGCCG CGTGGGCGGA GCCATGGTGG CGGCCAACCT GGCGCACCAC CTGCGCACGC ATTTCGCCGA CAAGCCAGCG CACTGGCGCC CGCTGGTCTA CTGCTGGCGC GGCGGCATGC GCAGCGGCTC CATGGTGCAG TGGATGCGCC TGGTGGGCTG GGACGCACAG CAGCTCGCCG GCGGCTACAA GTCCTTTCGC CGCCATGTGA TGACGCAGAT CGAGACGCTG GTGCCGCAGC TGGAGCTGCG CGTGCTGGTG GGCGCCACCG GCAGTGCCAA GACGCGCGTA CTGCAGCAGT TGGCCGGCAT GGGCGCGCAG GTGCTGGACC TGGAGCACTG CGCCCGCCAC AAGGGCTCGC TGCTCGGCGC GCTGCCGGGC GTGCCGCAGC CGTCGCAAAA GAATTTCGAG ACACAGATCG CCACCGCGCT GGAGGCGCTG GATCTGTCGC GCCCCGTGTA TGTGGAGGGC GAGAGCGCGC GCATCGGCCG CCTGTCGGTA CCCGTGCCGC TGGTGCAACG CCTGCGCGCC GCCGCGTGCA TCGAGATCGA AGCCACGCCC GAAGAGCGCC TGACCTACCT GCTGCGCGAC TACGCTTACC TGGGCGACGA CCCTGACGCC CTGGCCAAGC GCCTGGGCAC GCTCACCGAG CTGCAGGGCA AGGAAGTCGT GCAGCGCTGG CAGGCCTGGG CCCGGGCGGG GGAGCTGTCC GCGCTGTTCG CCGAGCTGAT GCTGCTGCAC TACGACCCGC ACTACGGCCG CTCGCAGGCA CGCAACTTTG CGCGGTGGGA GCAGCGCCAG CGCGTAGGCG CGCCGGACCT GTCGCCCGAG GGCATCGCCG GCGTGGCGCA GGCCGTGCTG GCGCTGGGAT AG
|
Protein sequence | MCRGRAARII PDSHLPGFVQ HCIPVSHHRP TRPEDRHQFD ALIDARSPAE YAEDHIPGAI NCPVLNDEER AIVGTIYVQQ SAFEARRVGG AMVAANLAHH LRTHFADKPA HWRPLVYCWR GGMRSGSMVQ WMRLVGWDAQ QLAGGYKSFR RHVMTQIETL VPQLELRVLV GATGSAKTRV LQQLAGMGAQ VLDLEHCARH KGSLLGALPG VPQPSQKNFE TQIATALEAL DLSRPVYVEG ESARIGRLSV PVPLVQRLRA AACIEIEATP EERLTYLLRD YAYLGDDPDA LAKRLGTLTE LQGKEVVQRW QAWARAGELS ALFAELMLLH YDPHYGRSQA RNFARWEQRQ RVGAPDLSPE GIAGVAQAVL ALG
|
| |