| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3461 |
|---|
| Symbol | |
|---|
| ID | 4674079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3655515 |
|---|
| End bp | 3656720 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639840494 |
|---|
| Product | formate dehydrogenase gamma subunit |
|---|
| Protein accession | YP_987651 |
|---|
| Protein GI | 121595755 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.293351 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACC TCTTGTGTGC ATTGCTGCTC GCCAGCGGTG CCGCGTGGGC GCAGGCCCCG
GCGGCGCCCG CCAGCGACGC GGCAGCGCCC GCGGCGGCAG ACGCTGCCCC TGTGCCGGCG
GCGGTTGGTG CCGTCAAAAG CCAGAACATC TTCGACGTGA AGCCCGATGC CAGTGAGGAG
CCGGGCTACG CCCAGCAGAC CAACGGTGAG CGTGCCAAGG TTCAGCCGGG CAACAACGCG
CCCATGTGGC GGCAGGTGCG AGATGGGGTG ACGGGCTACA GCAGCCTGCC GGCGAGCCAG
GCCCCTGAGG CCGGCAACCT GATCCAGCCG TTCGCGCAAT ACCCCGGCTC GCGCTACACC
ACGGCAGGCC AGGCGTGGCG CGAGGTGCGC AATAACTGGA TCATTCCCTA CGGCGCGGCC
TTGCTGGGCA TCACCGTGCT GGCGCTGGCC ATCTTCTTTG TGACCAAGGG CACCCTGGGC
CACGCGGATG CCGAGGCTGG CGGTCGCCGG ATCGAGCGCT TCACGCCCTT CGAGCGCGCG
GCGCACTGGT CCAATGCGAT TGCGTTCGTC ACGCTGGCCA TCACGGGCAT CCTGATGGCG
TTCGGCAAGT TCTTCCTGCT GCCCGTGCTG GGCGCACAGC TCTTCGGCTG GCTGGCGTAC
GCGGCGAAGA ACGTGCACAA CTTCATGGGC CCGCTGTTCG CCGTGTCGCT CACGGTGATC
ATCGTCACTT TCATCAAGGA CAACATCGCC AACCGCGCGG ACTTCGTCTG GCTGTCCAAG
GCAGGTGGCA TGTTCACCAA CAAGGAAGTG CCGTCGCACC GCTTCAACGC AGGCGAGAAG
GGCATGTTCT GGTGGGGCAT CACTATTCCC GGCGTGTTTG TTGTGCTGTC GGGCCTGGTG
CTTGACAAGT TGATCCCCGG CTGGGGCCTG CTGCGCGGAG AGATGCAGAT CGCCCACATG
GTGCACGCCA CGCTGGCCCT CTGGATGATG GCGCTGCTGC TGGGTCACAT CTACATGGGC
ACGATCGGCA TGCGCGGGGC CTACAAGGCC ATGAAGACCG GTTACGTAAG CGAGGCCTGG
GCGCGCGAGC ACCATGAGCT GTGGGCCGAC GATGTCCGCA GCGGCAAGAT TCCCGCACAG
CGCAGTGGTG CGGCTACCGC CGCGCAAACC ACGCCTTCCC ACCCCGCCGT AGGAGGAACC
TCATGA
|
|---|
| Protein sequence | MKHLLCALLL ASGAAWAQAP AAPASDAAAP AAADAAPVPA AVGAVKSQNI FDVKPDASEE
PGYAQQTNGE RAKVQPGNNA PMWRQVRDGV TGYSSLPASQ APEAGNLIQP FAQYPGSRYT
TAGQAWREVR NNWIIPYGAA LLGITVLALA IFFVTKGTLG HADAEAGGRR IERFTPFERA
AHWSNAIAFV TLAITGILMA FGKFFLLPVL GAQLFGWLAY AAKNVHNFMG PLFAVSLTVI
IVTFIKDNIA NRADFVWLSK AGGMFTNKEV PSHRFNAGEK GMFWWGITIP GVFVVLSGLV
LDKLIPGWGL LRGEMQIAHM VHATLALWMM ALLLGHIYMG TIGMRGAYKA MKTGYVSEAW
AREHHELWAD DVRSGKIPAQ RSGAATAAQT TPSHPAVGGT S
|
|---|
| |