Gene Ajs_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3452 
Symbol 
ID4674158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand+ 
Start bp3645689 
End bp3646372 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content74% 
IMG OID639840485 
ProductSmr protein/MutS2 
Protein accessionYP_987642 
Protein GI121595746 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.329069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.857372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTACA ACCGCCCCCA GCCCATGAAC GCTGCCCTCA CCGCCCGTTC CTTCGCCGAC 
CTCAAGCCCC TGCGCCGTGC GTTGCAGGAG GCCGCGCAGC AGCAGGCCGA GCGCGAGCGC 
CTGCGCCGCG AGGCCGAGCG GCACGCGCGC GCCGAGCGCC ACCTGTTCGC CGACGCAGTG 
GGCCCCGTGC AGCCGCTCAA GCGGGGACAC GAGCGGCGCT GGTCCACGCC CGAGCCGCTG 
CCCGTGCAGC GCGCGCTGGA CGAAGAGCGC GTGCTGCGCG AGTCGCTGAG CGACGAGTTC 
GACGTGACCA CGCTGCTGGA CGTGGACGAC CAGCTCAGCT TTCGCCGCCC GGGCATCGGG 
CTGGACGTGA CGCGCAAGCT GCGCGGAGGG CACTGGAGCA TCCAGCGCCA GTTGGACCTG 
CACGGCCTGC GCACCGATGA GGCGCGCGAG GCGCTGGGCG ATTTCATCCG CCTGGCGCAC 
CGCACGGGCC TGCGCTGCGT GCGCGTGGTG CATGGCAAGG GGTTGGGGTC GCCGGGCCGC 
ACACCGGTGC TCAAGGGCCG GGTGCAACGC TGGCTGGTGC AAAAGAAAGA GGTGCTGGCC 
TTCGTGCAGG CGCGGCCGCT GGACGGCGGC GCGGGCGCGC TGGTGGTGCT GCTGCAGCCC 
GGGCGGCGCA GGCCGGGCGG CTGA
 
Protein sequence
MRYNRPQPMN AALTARSFAD LKPLRRALQE AAQQQAERER LRREAERHAR AERHLFADAV 
GPVQPLKRGH ERRWSTPEPL PVQRALDEER VLRESLSDEF DVTTLLDVDD QLSFRRPGIG 
LDVTRKLRGG HWSIQRQLDL HGLRTDEARE ALGDFIRLAH RTGLRCVRVV HGKGLGSPGR 
TPVLKGRVQR WLVQKKEVLA FVQARPLDGG AGALVVLLQP GRRRPGG