Gene Ajs_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3447 
Symbol 
ID4674329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3640649 
End bp3641971 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content67% 
IMG OID639840480 
Producthypothetical protein 
Protein accessionYP_987637 
Protein GI121595741 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAG CAATACTGTT CGCCCTCATC CTGCTCAATG GCGTGTTCGC CATGTCCGAG 
CTGGCTCTGG TCTCCGCGCG CAAGACGCGC CTGCAGAAGC TGATCGATGA GGGCGATAGC
GGGGCGATCG CCGCGGCCAA GCTGGGTGAG AACCCCACGC GCTTTCTCTC CACCATCCAG
ATCGGCATCA CCTCGATCGG CGTGCTCAAC GGCATCGTGG GCGAGTCGGC CCTGGCCAAG
CCGCTGGGCG AGTGGCTGCT GGGCCTGGGG GTGGAGCCGC AACTGGCCGG CTACCTGGCC
ACGGGCCTGG TGGTGGTGCT GATCACCTAC TTCTCGATCG TCGTGGGCGA GCTGGTGCCC
AAGCGGCTGG GCCAGAGCTA CCCCGAGACG CTGGCGCGCG TCGTGGCGCG CCCCATCAAC
TGGCTGGCGC TCGCCACCAA GCCCTTCGTG CGCCTGCTGT CGATCTCCAC CGAGGGGCTG
CTGCGCGCCC TGGGGGTGAA GGAATATTCC GCCAGTGCCG TGACCGAGGA CGAGATCCAT
GCCGTGCTGG CCGAGGGCAC GAGCGCCGGC GTGATCGAGT CGCACGAGCA CCAGATGGTG
CGCAACGTGT TCCGCCTGGA TGATCGGCAG ATCGGCTCGC TCATGGTGCC GCGTGCGGAC
GTGGTGTTCC TGGATGTGGA GGAGCCTTTC GAGGAGAACC TGCGGCGCAT CGAGGAGTCC
GACCATGCGC GCTTTCCGGT GGTGCGCGGC GGCATGGAGA ACATCCTGGG CGTGCTCAAC
GCGCGCCAGT GGCTGTCGCG CACGGTGCGC GATGCCCAGG CGCGCGACCT GACGACCCAG
CCGCTGCAGA CGGCGCTGTA CGTGCCCGAG ACCATCAATG CCATGGAACT GCTGGACAAC
TTCCGGCAGT CCGACGTACA GATGGCCTTC GTCATCGACG AATACGGCGA GGTGCAGGGC
ATCGTGACCG TGCAGGACAT CATCGAGGCC ATCACGGGCG AGTTCCAGCC GCGCGACCCC
GAAACCTCCT GGGCCATGGA GCGCGAGGAC GGCAGTTGGC TACTGGACGG CCACATCCCC
GTGCCCGAAC TCAAGGACCG GCTGCAGTTG GCCACCGTTC CCGAAGAGGA CCGCGGCCGC
TACCAGACCC TGAGCGGCAT GGTCATGTTG CTGACCGGCA AGCTGCCCAA GGTCACCGAC
ACGGTGCAAT GGGAGCGCTG GCGCTTCGAG GTGGTGGACA TGGATGGCAA GACCATCGAC
AAGGTGCTGG CCTCCCGCCT GCCCGACGAG GAGGTCAGCG CCGATCCTGC GAGCGGCGAC
TGA
 
Protein sequence
MEIAILFALI LLNGVFAMSE LALVSARKTR LQKLIDEGDS GAIAAAKLGE NPTRFLSTIQ 
IGITSIGVLN GIVGESALAK PLGEWLLGLG VEPQLAGYLA TGLVVVLITY FSIVVGELVP
KRLGQSYPET LARVVARPIN WLALATKPFV RLLSISTEGL LRALGVKEYS ASAVTEDEIH
AVLAEGTSAG VIESHEHQMV RNVFRLDDRQ IGSLMVPRAD VVFLDVEEPF EENLRRIEES
DHARFPVVRG GMENILGVLN ARQWLSRTVR DAQARDLTTQ PLQTALYVPE TINAMELLDN
FRQSDVQMAF VIDEYGEVQG IVTVQDIIEA ITGEFQPRDP ETSWAMERED GSWLLDGHIP
VPELKDRLQL ATVPEEDRGR YQTLSGMVML LTGKLPKVTD TVQWERWRFE VVDMDGKTID
KVLASRLPDE EVSADPASGD