| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3424 |
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| Symbol | |
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| ID | 4674555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3616956 |
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| End bp | 3618680 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639840459 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_987617 |
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| Protein GI | 121595721 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG TAGCAAGAGA CATCCCACCG CGCGTGGTCT GGGCGCTGGA GCAGGCCGGC
GTGCACCCGC TGCTGGCACG CCTGTACGCG GCGCGCGGCA TCCGCGCCAA GGAGGAGCTG
GACGACGCCC TCGCCCGCCT GCTGCCGCCC GACACCCTCA TGGGCGTGCA GCAGGCCGCG
GCGCTGCTGG CCGACGCCAT CAGCCAGGAC CGGCGCCTGC TCATCGTGGC CGACTACGAC
TGCGACGGCG CCACTGCGTG CGCAGTGGGG GTGCGCGGCC TGCGCCTGCT GGGCGCACGC
CATGTTCAGT ATTTGGTGCC CGACCGCGTG GTGGACGGCT ACGGCCTCAC CGCCTCCATC
GCGCAGCGCG TGCACGAGCG CGGCGCCGAC GTGCTCATCA CCGTGGACAA CGGCATCGCC
AGCATCGAGG GCGTGGCGCG CGCCAAGGCG CTGGGGCTGA CCGTGCTCAT CACCGACCAC
CACCTGCCCG GCCCCGAACT TCCCGCGGCC GACGCCATCG TCAACCCCAA CCAGCCGGGC
TGCGGCTTCG AGAGCAAATC CATCGCCGGC GTGGGCGTGA TGTTCTACGT GCTCATGGCG
CTGCGCGCCG AGCTGCGCGC GCGCGGCGTG TTCGACAAGG CCACGCAACC CAAGCTGGAG
CCGCTGCTGC CGCTGGTGGC CCTGGGCACC GTGGCCGATG TGGTGCGCCT GGACAACAAC
AACCGCCGCC TGGTGGCGCA GGGCTTGAAG CGCATCCGCG CCGGCCAGAT GCAGCCCGGC
ATCCAGGCCC TGTTCGACGC CGCCGGGCGC AAGGCCCCCG CGGCCACCAC CTTCGACTTC
GGCTTTGCCC TTGGGCCCCG CATCAATGCC GCGGGGCGCC TGGCCGACAT GACGCTGGGC
ATCGAATGCC TGCTGACCGA CGACCCGGCA CGCGCCGCCG ACCTGGCCCG GCAACTAGAT
GCCATCAACC GCGAGCGGCG CGAGCTGGAA GGGGGCATGC GCGAGCAGGC CCTGCTGCTG
GCCGAGAGCC TGTTCGACGA AGGCCAGGAG CCGCCGCCCG CCATCAGCGT GTTCGACCCG
GACTTTCACG AGGGCGTGGT GGGCATCGTG GCCTCGCGGC TCAAGGACAA GCTGCACCGC
CCCACCTTCG TGTTCGCTGC CAGCAGCGCG CCGGGCAAGG AGCATGAGCT GAAGGGTTCG
GGGCGGTCCA TCCCCGGTTT TCACCTGCGC GACGCGCTGG ACCTGGTGGC CAAGCGCCAC
CCCGGCGTGA TCCTGAAGTT CGGCGGCCAC GCCATGGCGG CCGGCTGCAC CGTGGCCGAG
GAGCATTTCG ACCTCTTCGA GCAGGCCTTC GCCCAGGTCG CACAGGAATG GCTGGATGCC
GCGACGCTCA CGCGCCGGCT GGAGACCGAC GGCCCGCTGG CCCCGGAATA CTGCCGCGCC
GAGCTGGTGG ACACGCTGCA CCGCGAGGTC TGGGGCCAGG GCTTTGCGCC GCCTACCTTC
AGCGAGGAAG TGCAGGTGCT GAGCCAGCGC CTGGTGGGCG AGGCGCGCAA CCACCTGTCT
ATCAAGCTGC TGCACCAGGG CCAGCCCGTG GACGCCATCT GGTTCGGCCA CACCGACCCG
CTGCCCGAAC GGGCGTTGCT GGCCTTCCGG CTGGACGTGA ACGAGTGGCG GGGCGAGCGG
CGGGTGCAGT TTCTGGTGGA GGGACTGGAG TCGCCTGCAA TGTGA
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| Protein sequence | MKIVARDIPP RVVWALEQAG VHPLLARLYA ARGIRAKEEL DDALARLLPP DTLMGVQQAA
ALLADAISQD RRLLIVADYD CDGATACAVG VRGLRLLGAR HVQYLVPDRV VDGYGLTASI
AQRVHERGAD VLITVDNGIA SIEGVARAKA LGLTVLITDH HLPGPELPAA DAIVNPNQPG
CGFESKSIAG VGVMFYVLMA LRAELRARGV FDKATQPKLE PLLPLVALGT VADVVRLDNN
NRRLVAQGLK RIRAGQMQPG IQALFDAAGR KAPAATTFDF GFALGPRINA AGRLADMTLG
IECLLTDDPA RAADLARQLD AINRERRELE GGMREQALLL AESLFDEGQE PPPAISVFDP
DFHEGVVGIV ASRLKDKLHR PTFVFAASSA PGKEHELKGS GRSIPGFHLR DALDLVAKRH
PGVILKFGGH AMAAGCTVAE EHFDLFEQAF AQVAQEWLDA ATLTRRLETD GPLAPEYCRA
ELVDTLHREV WGQGFAPPTF SEEVQVLSQR LVGEARNHLS IKLLHQGQPV DAIWFGHTDP
LPERALLAFR LDVNEWRGER RVQFLVEGLE SPAM
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