Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3415 |
Symbol | |
ID | 4674599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3609945 |
End bp | 3610568 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639840450 |
Product | hypothetical protein |
Protein accession | YP_987608 |
Protein GI | 121595712 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0418768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTTCGG GCTCCAAGGC TTATGCAGCA AGCGCAAGCA GCTATACAAA CAATAGTAAT GGAGGGCCGG TGGCTGCGCA GAAAAAAACG GTAGTGCTGT CTGCCGGTCG TCTGGTCGGC CTGCCGCCCA TGGTGGGCTC CGGCACGCGG GTGCTGGTGC TGGGCAGCTT CCCCGGCGTG GCATCGCTCG CCGCGCAGCA GTATTACGGC CATCCGCAGA ACCACTTCTG GCGCATCCTG GCGGCGCTGT GGCCGCAGCA TCCGCTGCCG GGCCGCGACC AGTACGCCGC GCGCTGCGAC TGGCTGCTGG CCCGCGGCCT GGGCCTGTGG GACGTGTATG CCGCCTGCGA GCGCGAGGGT AGCCTGGATA CCAGCATCCG CAACGCGCAG GTCAACGACT TCGCCGGCCT GCATGCCCGC GCGCCGGGGC TGGCCGCCAT CGCCCACAAT GGCGGGGAAA GCTTCCGCCA CGCCAAGGCC GTGCGCGCCA GCCTGGGGCT GAAGGCAGAT GCGCCGATGC CATCGCTGCG CCTGCCATCC ACCAGCCCGG CCAACGCGTC GTGGAGCTTC GAGAAAAAAC TGCACGCCTG GGGCGAGGCC CTGGCGACTT TTGGATTGGT ATAA
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Protein sequence | MLSGSKAYAA SASSYTNNSN GGPVAAQKKT VVLSAGRLVG LPPMVGSGTR VLVLGSFPGV ASLAAQQYYG HPQNHFWRIL AALWPQHPLP GRDQYAARCD WLLARGLGLW DVYAACEREG SLDTSIRNAQ VNDFAGLHAR APGLAAIAHN GGESFRHAKA VRASLGLKAD APMPSLRLPS TSPANASWSF EKKLHAWGEA LATFGLV
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