| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3413 |
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| Symbol | |
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| ID | 4674607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3607362 |
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| End bp | 3609158 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639840448 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_987606 |
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| Protein GI | 121595710 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCG AAGCATTGCC CGCATCCCCC CCCACGGCCG CCGGCGGGCC CACCGGCCCG
TTGCAGTGGC GGCTCATCGT CGATTGGCTG CGTGCCGATG GCGTGATCAC CGCCGAGCAG
GCGCAACGCA CCATCGCACG CTGCTCGCAG GCCGAAAGCA GCCAGCACCC GCTGGTGCGG
CTGGGCAACG TGGCCATGCT GCGCGCCAGC GACGGCAAGC CGCTGGACGT GGACATCCTC
ACCGAATACG TGGCCCAGCG CTGTGGCCTG GCGTTTCTGC GCATCGACCC GCTGAAGGTG
GACGTGGGCC GTGTGGCCGA CGCCATGAGC GCCAGCTACG CCGAGCGCCA CAAGGTGCTG
CCGGTGCAGG TGACCTCCAA GGAGGTGGTG GTGGCCACGG CCGAGCCCTT CCTGCATGAC
TGGGTGGCCG AGGTGGAGCG CCAGTCCCGG CGCACGGTAC GGCGCGTGCT GGCCAACCCC
CAGCACATCA CGCGCTACAC GGCGGAGTTC TACGCGCTGG CCAAGTCGGT GCGCGAGGCG
CAGAAGGCCG GCGGCGGCGC CGCGGGCAGC AGCTTCGAGC AGCTTGTGGA GCTGGGCAAG
ACCAACAAGC AGCTGGACGC CAACGACCAG GGGGTGGTGC GCGTGGTGGA CTGGCTGTGG
CAGTACGCCT TCGACCAGCG CGCGAGCGAC ATCCACCTGG AGCCGCGCCG CGAGCAGGGC
GTGATCCGCT TTCGCATCGA CGGCGTGTTG CATGCCGTCT ACCAGATGCC CATGGGCGTG
CTCAATGCCA TGGTGGCGCG CGTGAAGCTG CTGGGCCGCA TGGACGTGGT GGAAAAGCGC
CGCCCGCAGG ACGGCCGCAT CAAGACGCGC AACCCGCGTG GCGACGAGGT GGAAATGCGC
CTGTCCACGC TGCCCACCGC TTTCGGCGAG AAGATGGTGA TGCGCATCTT CGACCCCGAC
AACGCCGTGA AGGATCTGGA CGCGCTGGGT TTCACCGCGC ACGATGCGCA GCGCTGGGAG
CAGCTCGTCA AGCGCCCGCA CGGCATCATC CTGGTGACCG GGCCCACGGG TTCGGGCAAG
ACCACTACGC TGTACTCCAC CCTGAAGCGC GTGGCCACCG AGGAGGTGAA CGTGAGCACG
GTGGAGGACC CGATCGAGAT GATCGAGCCC AGCTTCAACC AGACGCAGGT GCAGCCGCAG
CTGGACTTCA CCTTCGCCGA AGGGCTGCGT GCCCTCATGC GCCAGGACCC GGACGTGATC
ATGGTGGGCG AGATCCGTGA CCTGGCCACG GCCGACATGG CCGTGCAGGC CGCGCTCACC
GGCCACCTGG TGTTCTCCAC CCTGCACACC AACGACGCGC CCAGCGCCGT CACGCGCCTC
ATGGAGCTGG GCGTGCCGCC GTACCTCATC AACGCCACGC TGCTGGGGGT GCTGGCGCAG
CGCCTGGTGC GCACGCTGTG CCGGCACTGC CGGCAGGTGG ACGAGGCGGC CGACCCCGAG
GCGCTGGCCG ACATGATCCG CCCCTGGAAG ATCAACGGGG GCTATCGCGC CTACAAGCCC
GTGGGGTGCG TGGAGTGCCG TATGACGGGC TTTCGCGGCC GCATGGGGCT TTATGAACTG
CTCACCGTGA GCGAGGCGCT CAAGACCCAG GTGAACCAAT CGCCCTCCAT CGACGCGCTG
CGCCGCCAGG CCGTGCAGGA CGGCATGCGC CCGCTGCGCC TGGCGGGCGC GCTGCGCGCG
GCCGAAGGCG TGACCACGTT CGAGGAAGTC ATCGCCGCCA CCCCGCCGCT CGAGTAG
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| Protein sequence | MTAEALPASP PTAAGGPTGP LQWRLIVDWL RADGVITAEQ AQRTIARCSQ AESSQHPLVR
LGNVAMLRAS DGKPLDVDIL TEYVAQRCGL AFLRIDPLKV DVGRVADAMS ASYAERHKVL
PVQVTSKEVV VATAEPFLHD WVAEVERQSR RTVRRVLANP QHITRYTAEF YALAKSVREA
QKAGGGAAGS SFEQLVELGK TNKQLDANDQ GVVRVVDWLW QYAFDQRASD IHLEPRREQG
VIRFRIDGVL HAVYQMPMGV LNAMVARVKL LGRMDVVEKR RPQDGRIKTR NPRGDEVEMR
LSTLPTAFGE KMVMRIFDPD NAVKDLDALG FTAHDAQRWE QLVKRPHGII LVTGPTGSGK
TTTLYSTLKR VATEEVNVST VEDPIEMIEP SFNQTQVQPQ LDFTFAEGLR ALMRQDPDVI
MVGEIRDLAT ADMAVQAALT GHLVFSTLHT NDAPSAVTRL MELGVPPYLI NATLLGVLAQ
RLVRTLCRHC RQVDEAADPE ALADMIRPWK INGGYRAYKP VGCVECRMTG FRGRMGLYEL
LTVSEALKTQ VNQSPSIDAL RRQAVQDGMR PLRLAGALRA AEGVTTFEEV IAATPPLE
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