| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3408 |
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| Symbol | |
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| ID | 4674642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3601000 |
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| End bp | 3602082 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639840444 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_987602 |
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| Protein GI | 121595706 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGCC CCGCACTGCG CGGGCGGCTG GCCTTGTGGG GCGCGGCGCT GCTGTACGCG
GCAGCGCACG CCGGCGCGCC GGACACGCCC GCGGCCGATG CCGCGCCGTT GCGCCTGCGC
GTGGTGGGAG GGCTGGCCGG CGTCACGCAG TACACGCAAC TGGAGGCGCC CTTCTGGACG
CGCGATTTGC CGCGCCTGAG CGAGGGCCGC TACCGCGCCG ATATCGTGCC CTTCGACCGT
GCCGGCGTTC CGGGCATGGA GATGCTGCGC CTCTTGCAAC TGGGCGTGGT GCCCTTCGGC
ACGGTGCTCA TGAGCTCCCT GTCGGCACAG TACCCCCAGT ACACCGCCGT GGACCTGCCG
GGGCTGAATC CGGACCTGGC GACGCTGCGC GCTTCGCTCG CGGCCTTCCG TCCGTACCTG
GAGAAAGCCC TGCGCGAGGA GCATGGCGTG GAGCTGCTGG CGGTTTACGT TTACCCGGCG
CAGGTGCTGT TCTGCAAGGA CCCGCTGCTG GGCCTGGATG ACCTGCGCGG GCGGCATGTG
CGGGTGTCCT CGGCCGCGCA GGGCGATTTT TTTGCGGCGC TGGGCGCCAA GCCCCAGCGC
GTGCCCTTCG CGCAAGTGGT CAAGAGCATG GAGACGGGCG CCAGCGAATG CGCCGTCACC
GCCAGCATGT CGGGCAACAT CCTCGGTCTG CACGCACATG CGGCCTATCT CTACCCCATG
CCCATCAGCT GGGGCATGGC GGTGTTTGCG GCCAATCGCG CGGCCTGGCA GGCGCTGCCC
GCCGATCTGC GCCAGCTGCT GCAGGCCGAG CTGCCCAAGC TGGAGACGGC CGTGTGGCTC
AGTGCCCAGG GCGAGACCGA GCAGGGCCTG GCCTGCAATG TCGGGAGCCC CAGCTGCACC
ACTGGGCGCC AGGGCGCCAT GGCGCTGGTG CCGGTGCGCG CGCAGGACGA GGCGCGGCGC
GAGACCATCT TCAACACCGT GGTGCTGCCG CGCTGGGTCC GGCGCTGCGG AGCCCGCTGC
CGTGATATCT GGGATCGCAC CATCGGTCCT GCGCGCCGCA TGAGTGCGCC GGTGCAGCCA
TGA
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| Protein sequence | MRCPALRGRL ALWGAALLYA AAHAGAPDTP AADAAPLRLR VVGGLAGVTQ YTQLEAPFWT
RDLPRLSEGR YRADIVPFDR AGVPGMEMLR LLQLGVVPFG TVLMSSLSAQ YPQYTAVDLP
GLNPDLATLR ASLAAFRPYL EKALREEHGV ELLAVYVYPA QVLFCKDPLL GLDDLRGRHV
RVSSAAQGDF FAALGAKPQR VPFAQVVKSM ETGASECAVT ASMSGNILGL HAHAAYLYPM
PISWGMAVFA ANRAAWQALP ADLRQLLQAE LPKLETAVWL SAQGETEQGL ACNVGSPSCT
TGRQGAMALV PVRAQDEARR ETIFNTVVLP RWVRRCGARC RDIWDRTIGP ARRMSAPVQP
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