Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3406 |
Symbol | |
ID | 4674670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3597389 |
End bp | 3598291 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639840443 |
Product | hypothetical protein |
Protein accession | YP_987601 |
Protein GI | 121595705 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.562022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAAC GACTCTCACC GGGCACGATT GCGATGCTCG TGGCCGCGCC GCTGCTATGG GCCGGCAATG CCGTGGTCGG ACGCGCGCTG AACACGCTGA TCCCGCCCAT CACCCTGAAC TTCGTGCGCT GGCTGCTGGC GTTTGCGCTG CTGCTGCCGC TGGCCTGGCA GGTGCTGCGC CCCGGCAGCC CGCTGTGGCC GCACTGGCGC CGCTATGCGC TGCTGGGCCT GCTGGGCATC GGCAGCTACA ACGCGCTGCA GTACCTGGCG CTGCAGACCT CCACGCCGCT GAACGTGACG CTGGTGGGCT CGGGCATGCC GGTATGGATG CTCATCATCG GCGCGCTGTG CTTCGGCGTG CCGGCCTCGC GCAGGCAAAT AGCGGGAGTG CTGCTGTCGG TGGCCGGCGT AGTGCTGGTG CTCAGCCGCG GCAGCTGGGA GCAGTTGCTG GCACTGCGCC TGGTGCCGGG CGACCTGTAC ATGGTGGCGG CCACCATCTC CTGGTCGCTC TACAGCTGGC TGCTGGTGCG CACCAGCGAG CCGCGCGAAC TGCGCGGCGA CTGGGCGGCC TTCCTCATGG CGCAGATGAT CTTTGGACTG GGCTGGTCGG GCGCCTTTGC GGGCGTGGAA TGGTCACTGG GCGCCACGCA GATCACCTGG GGCTGGCCGC TGGCTGCTGG CCTGGCCTTC ATCGCCGTGG GCCCGGCCAT CCTGGCCTAC CGCTTCTGGG GCGTGGCGGC GCAACGCGCG GGGCCGGTGG TGGGGGGATT CTTCATCAAC CTCACACCGC TGTTCGCGGC AGTGCTGTCC ACGATCTTCC TCGGAGAAGC GCCGCACCTG TACCACGCCC TGGCGTTCGC GCTGATCGTG GGTGGCATCG TGGTGTCGTC GCGCAGGGCC TAG
|
Protein sequence | MTQRLSPGTI AMLVAAPLLW AGNAVVGRAL NTLIPPITLN FVRWLLAFAL LLPLAWQVLR PGSPLWPHWR RYALLGLLGI GSYNALQYLA LQTSTPLNVT LVGSGMPVWM LIIGALCFGV PASRRQIAGV LLSVAGVVLV LSRGSWEQLL ALRLVPGDLY MVAATISWSL YSWLLVRTSE PRELRGDWAA FLMAQMIFGL GWSGAFAGVE WSLGATQITW GWPLAAGLAF IAVGPAILAY RFWGVAAQRA GPVVGGFFIN LTPLFAAVLS TIFLGEAPHL YHALAFALIV GGIVVSSRRA
|
| |