Gene Ajs_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3404 
Symbol 
ID4674707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3595453 
End bp3596274 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content72% 
IMG OID639840442 
ProductNUDIX hydrolase 
Protein accessionYP_987600 
Protein GI121595704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.707971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC CCAGCCAGCC GGCGCCCGCC TGGGTGGCCG CCGCACGCCG GCAGGCGCAG 
TGTCCGCCTG CCGCACCGCG CGTGCCACTG CTGTTGGGGT GCGAGTGCGT GGGGTCGGTG
GATGCCGCGG TTTTTGACCA GATTGGCATT CAGAGATTGC TGGACAAGCG CTGGCAGCTA
TCACAAGTAG AGCATCAAGG GCAACCCGCC TGGGCCCTGC CGGCGCAGGA GGCCACGGCG
GCGCTGAATG CGCTGGCCCA TGCGCTGCGC GCGGCGGGCT GCTGCGGCCC CTGGCGCGAC
GAGCAACTGG CCGTGTGCGC GCCCGATGGC CGGCGCCTGG CGACCGTGGA GCGCGGGGCC
GTGCGCGTGC TGGGGTTGGC CACGCAGGCC GTGCACCTGG TGGGCCGCAC GGCGGGGGGC
GCCCTGTGGG TGCAGCAGCG CTCCTTCACC AAGCCCAACA ACCCCGGCCA GTGGGACACG
CTGATGGGCG GAATGGTGTC CGCGGCCGAC AGCCTGCATG AAGCCCTGGC GCGCGAGACA
TGGGAGGAGG CCGGGCTGCG CCTGGAGCAA CTGCAGGCCC TGGCAGCCGG CGGCCATGTG
CAGTTTGCGC AGCCCAGCAG CGAGGCGGGT GGCACCGGCT ACATGGTGGA GCGCATCGAC
TGGTTCCACG CCACCGTGCC CGAGGGCGTG GTGCCGGTGA ACCAGGATGG CGAAGTGGCG
CGCTTCGAAT GCCTGACCCA TGGCGAGGTG CACGAGCGCC TGGCTCAAGG GGCGTTCACG
CCGGAGGCGG CGCTGGTGCT GGCCGGTTTC TATGGTTGGT GA
 
Protein sequence
MTAPSQPAPA WVAAARRQAQ CPPAAPRVPL LLGCECVGSV DAAVFDQIGI QRLLDKRWQL 
SQVEHQGQPA WALPAQEATA ALNALAHALR AAGCCGPWRD EQLAVCAPDG RRLATVERGA
VRVLGLATQA VHLVGRTAGG ALWVQQRSFT KPNNPGQWDT LMGGMVSAAD SLHEALARET
WEEAGLRLEQ LQALAAGGHV QFAQPSSEAG GTGYMVERID WFHATVPEGV VPVNQDGEVA
RFECLTHGEV HERLAQGAFT PEAALVLAGF YGW