| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3400 |
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| Symbol | lspA |
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| ID | 4674083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3590379 |
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| End bp | 3590876 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639840438 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_987596 |
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| Protein GI | 121595700 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.256213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCG CCGCCGTATC CCGCAGCGCC AGCCTGTGGC CCTGGTTGGC CTGGGCCGTG
CTGCTCGTCA TTGCCGACCA GTTCACCAAG ACGCTGATCC TGGGCTACTA CCGCCTGGGC
GACGCGACCT ACGTGACCAG CTTCTTCAAC ATCGTGCGGG CGCACAACAC CGGGGCGGCG
TTCTCCTTCC TGGCCGATGC CGGGGGATGG CAGCGCTGGC TGTTCACGGG CATTGCGCTG
GCAACGGCGG TCTTCATCCT GTGGCAGCTG CGCGCCCACC CGGGGCAGAA GCTGTTTTGC
TTCGCGCTGT CCAGCATCCT GGGCGGTGCC ATCGGCAACG TGGTGGACCG CCTGCAGCAT
GGCTACGTGG TGGACTTCCT GGACTTTCAC CTGCGCGGCT GGCATTTCCC GGCCTTCAAC
GTGGCCGACT GCGCCATCAC CGTGGGCGCG GCCTGCCTGA TCCTGGACGA ACTGCTGCGC
GTGCGCCGCG CCGGCTGA
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| Protein sequence | MARAAVSRSA SLWPWLAWAV LLVIADQFTK TLILGYYRLG DATYVTSFFN IVRAHNTGAA
FSFLADAGGW QRWLFTGIAL ATAVFILWQL RAHPGQKLFC FALSSILGGA IGNVVDRLQH
GYVVDFLDFH LRGWHFPAFN VADCAITVGA ACLILDELLR VRRAG
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