| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3387 |
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| Symbol | |
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| ID | 4673989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3574648 |
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| End bp | 3575925 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639840425 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_987583 |
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| Protein GI | 121595687 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.228873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCCA AAGCCCTTGT GGACGCCTGC GCGGAACTCG TCAGGCTGGT CCTTACTTTT
GAACACCCGG CCGACGCCGT GGTCTCGCGC TACTTCCGCG AGCACCGCGG CCTGGGCCCG
CGCGAGCGCG CCACGCTGGC CGAAACCGTC TACAACGTCC TGCGCAAGAA GCTGTTGTTC
GAGCAACTCG CGCGCTCGGG CGCGGGCCCC AAGGAGCGGC GCTTGGCCAT CCTGGGCTTT
CACGGCCCGC GCGACTTCGT CAAGAGCGCA CTGACCGAGC AGGAAAAGTC CTGGCTGGAC
CAGTGCGACG CCGTGCGTCC TGAAGACCTG CTGGCGCCGC ACCGCCACAA CCTGCCCGAG
TGGCTGGTGG CGCCGCTCAA GCAGCAGCTG GGCGAGAGCG GCTTCTGGGC CCTGGCCGAC
AGCCTGGCGC AGCCTGCGCC ATTGGACCTG CGCGTCAATG CCTTGAAGGA AAAACGCGAC
CAGGTGCAGA AGGAGCTTGC GCAAGCAGCT ATCAAATCGG TAGTGACACC CTACTCTCCC
TGGGGACTGC GCATCGCCGG CAAGCCTGCG CTTACCAAGC TGGACGCGTT CACGCGCGGC
GCCATCGAGG TGCAGGACGA GGGCTCGCAG TTGCTCGCGC TGCTGCTGGA CGCCAAGCGC
GGCGAGATGG TGGTGGACTT CTGCGCCGGT GCCGGCGGCA AGACGCTGGC CATCGGCGCG
GCCATGCGCA GCACGGGGCG GCTGTACGCC TTCGACGTGT CGGCCCACCG GCTGGAGGCG
CTCAAGCCCC GCCTGGCGCG CTCGGGCCTG TCCAACGTGC ACCCCGCGGC CATCGCCCAC
GAGCGCGACG AGCGCGTCAA ACGTCTGGCC GGCAAGATCG ACCGCGTGCT GGTGGACGCC
CCCTGTTCGG GCCTGGGCAC GCTGCGCCGC AACCCCGACC TGAAGTGGCG CCAATCGCCC
GAGGCGCTGC GGGAGCTGGC CGGCAAGCAG ACCGCCATCC TGGAAAGCGC GGCGCGCCTG
GTCAAACCTG GCGGGCGGCT GGTCTATGCC ACGTGCAGCG TGCTGCCGCA GGAAAACGAG
GCCATCGCCG AAGCCTTCGG CGCGGCGCAT GCCGATTTCG AGCCGCAGGA CGCCGGCGCG
CTGCTCACGC AGCTGAAGGT GCCCGATGCC GCACGCCTGT GCCATGGCGG CGCCAGCGGT
ACTGGATATC TGCGGCTGTG GCCTCATCTG CACCAGACGG ACGGTTTCTT CGCTGCCGTC
TGGACCCGGC GCGCGTAA
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| Protein sequence | MHPKALVDAC AELVRLVLTF EHPADAVVSR YFREHRGLGP RERATLAETV YNVLRKKLLF
EQLARSGAGP KERRLAILGF HGPRDFVKSA LTEQEKSWLD QCDAVRPEDL LAPHRHNLPE
WLVAPLKQQL GESGFWALAD SLAQPAPLDL RVNALKEKRD QVQKELAQAA IKSVVTPYSP
WGLRIAGKPA LTKLDAFTRG AIEVQDEGSQ LLALLLDAKR GEMVVDFCAG AGGKTLAIGA
AMRSTGRLYA FDVSAHRLEA LKPRLARSGL SNVHPAAIAH ERDERVKRLA GKIDRVLVDA
PCSGLGTLRR NPDLKWRQSP EALRELAGKQ TAILESAARL VKPGGRLVYA TCSVLPQENE
AIAEAFGAAH ADFEPQDAGA LLTQLKVPDA ARLCHGGASG TGYLRLWPHL HQTDGFFAAV
WTRRA
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