Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3378 |
Symbol | |
ID | 4673467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3565486 |
End bp | 3566712 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639840416 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_987574 |
Protein GI | 121595678 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.195678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTGA CCCCGATGCA CAAGCGCGTC ATTGCGCTGG ACGTTCACCA GGCCAAGATC ACGGCCTGCG CCGTTGTCGA ACATGACGAT GGCCGGGTAG AGGTCACCAA GCGAGACTTC GGCGCCTTCA AACGCGACCG CCGCGCCTTG GCGCAGTGGG CGCTGGAGAT GGCCCCTGAG GTCGTGGTGA TGGAGAGCAC AGGGGTGTAT TGGAAAAGCC CGTTTGCGGC GCTGGAGGCG GTGGGCCTTA TTGCTTGGGT GGTCAACGCG CGGCATGTCA AGGCTGTGCC CGGTCGCAAG ACCGACATGG CCGATGCACA GTGGCTGGCC ACGCTGGCGC GTGCGGGTTT GCTGCGCGCC TCGTTCATTC CACCGGTGCA GATGCGCCAG CTTCGCCTGG TAGCGCGCCA GCGGCAAAAG CTGGTGGGCA TGTGCAGCGC CGAGAAGAAC CGGCTGCACA AGGTGCTGGT GGACGCGGGC ATTCGCATCA ACGTGCTGGT GGCCGACATC CACGGACAGA GCGCGCGTGC CATGGTCAAA GCCCTGATCG AGGGACAGCC CATGCACGAG GTGCTGAACC ACAAGGGGCG GCTGCGAGCG AGCAGGCAAG AACTGTGCGA GGCCCTGAGC ACCGAGCAGT TCAGCGCAGT GCACCGCTTT GTGGCCCAGG AGATCGTGCA GCACATTGAG CAGATCGAGC AGCGCATCGC CCGCATGGAC CAGTACCTGC TGCAGGGCCT GCAACCCTGG CAGCCACAGC TCAGGCTGCT GCAGACCCTG CCGGGCATCG ACGAGCAGGG GGCGGCCATG CTGCTGGTGG AGATTGGTGC GGACATGAGC GTGTTTGGCA GTGCAGAGCG CCTGGCCAGT TGGGTGGGCA TCTGCCCAGG CAACAACGAG AGCGCGGGCA AGCGCAAAAC CGGGCGCATC CGCAAGGGCA ACGCCTGGGT CAGAAGGCTG CTGTGCGAGT TCGCCCAGGC TGCAGCACGA ACGCGCTGCG CACTCAAGGC CAAGTTCGAC GCGCTGACCA TCCGAAAGGG CCACAAGAAG TCAGTGGTGG CGCTGGCCCA CAAGATGCTG CGCACCATCT ACGCCATGCT CAGCAACGCA AGCCACTACC AGGACAAGGA GGTCGATTAC GAGGCGCTGA ACGTTCAGCG CAACGCGCCG CGCTGGATCA AAATGCTGCG CAAGCACGGC TTCATCGCCA CGCCCGCTGC CGCCTGA
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Protein sequence | MDLTPMHKRV IALDVHQAKI TACAVVEHDD GRVEVTKRDF GAFKRDRRAL AQWALEMAPE VVVMESTGVY WKSPFAALEA VGLIAWVVNA RHVKAVPGRK TDMADAQWLA TLARAGLLRA SFIPPVQMRQ LRLVARQRQK LVGMCSAEKN RLHKVLVDAG IRINVLVADI HGQSARAMVK ALIEGQPMHE VLNHKGRLRA SRQELCEALS TEQFSAVHRF VAQEIVQHIE QIEQRIARMD QYLLQGLQPW QPQLRLLQTL PGIDEQGAAM LLVEIGADMS VFGSAERLAS WVGICPGNNE SAGKRKTGRI RKGNAWVRRL LCEFAQAAAR TRCALKAKFD ALTIRKGHKK SVVALAHKML RTIYAMLSNA SHYQDKEVDY EALNVQRNAP RWIKMLRKHG FIATPAAA
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