Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3362 |
Symbol | |
ID | 4672538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3551304 |
End bp | 3552086 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639840402 |
Product | ABC transporter related |
Protein accession | YP_987560 |
Protein GI | 121595664 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.557965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATA CATCGAAAGA AGTGGTGCTG AAGGTCGCGG GCATCTCCAA GCGGTTTGGC GGCCTGCAGG CGCTGTCCGA CGTGGGCATC ACCATCCAGC GAGGCCAGGT CTATGGCCTG ATCGGTCCCA ACGGCGCGGG CAAGACGACG TTCTTCAACG TCATCACCGG CCTGTACACG CCCGATGCGG GCAGTTTTGA ACTGGCGGGC CAGCCCTACG AGCCCCGCGC CGTGCACCTG GTGGCCAAGG CGGGCATTGC GCGCACCTTC CAGAACATCC GGTTGTTCGC CGACATGACG GCGCTGGAGA ACGTGATGGT GGGGCGGCAC ATCCGCACGC ATTCCGGGCT CTTCGGGGCC ATCTTCCGCA CCAAGAGCTT CAAGGAGGAG GAGGCGGCCA TCGCCAAGCG CGCGCAGGAG CTGCTGGACT ACGTGGGCAT CGGCAAGTAC GCCGATTTCA AGGCGCGCAC GCTGTCGTAC GGCGACCAGC GCCGCCTGGA GATCGCGCGC GCCCTGGCCA CCGATCCGCA ACTGATCGCG CTGGACGAAC CCGCCGCCGG CATGAACGCC ACCGAGAAGG TGCAACTGCG CGAGCTGATC GACCGCATCC GCAACGACAA CCGCACCATC TTGCTCATCG AGCACGACGT GAAGCTGGTC ATGGGCCTGT GCGACCGTGT CACGGTGCTG GACTACGGCA AGCAGATTGC CGAGGGAACC CCTGCCGACG TGCAGAAGAA CGAAAAAGTG ATCGAGGCCT ATCTGGGCAC CGGCGGGCAC TGA
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Protein sequence | MADTSKEVVL KVAGISKRFG GLQALSDVGI TIQRGQVYGL IGPNGAGKTT FFNVITGLYT PDAGSFELAG QPYEPRAVHL VAKAGIARTF QNIRLFADMT ALENVMVGRH IRTHSGLFGA IFRTKSFKEE EAAIAKRAQE LLDYVGIGKY ADFKARTLSY GDQRRLEIAR ALATDPQLIA LDEPAAGMNA TEKVQLRELI DRIRNDNRTI LLIEHDVKLV MGLCDRVTVL DYGKQIAEGT PADVQKNEKV IEAYLGTGGH
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