Gene Ajs_3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3362 
Symbol 
ID4672538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3551304 
End bp3552086 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID639840402 
ProductABC transporter related 
Protein accessionYP_987560 
Protein GI121595664 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.557965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA CATCGAAAGA AGTGGTGCTG AAGGTCGCGG GCATCTCCAA GCGGTTTGGC 
GGCCTGCAGG CGCTGTCCGA CGTGGGCATC ACCATCCAGC GAGGCCAGGT CTATGGCCTG
ATCGGTCCCA ACGGCGCGGG CAAGACGACG TTCTTCAACG TCATCACCGG CCTGTACACG
CCCGATGCGG GCAGTTTTGA ACTGGCGGGC CAGCCCTACG AGCCCCGCGC CGTGCACCTG
GTGGCCAAGG CGGGCATTGC GCGCACCTTC CAGAACATCC GGTTGTTCGC CGACATGACG
GCGCTGGAGA ACGTGATGGT GGGGCGGCAC ATCCGCACGC ATTCCGGGCT CTTCGGGGCC
ATCTTCCGCA CCAAGAGCTT CAAGGAGGAG GAGGCGGCCA TCGCCAAGCG CGCGCAGGAG
CTGCTGGACT ACGTGGGCAT CGGCAAGTAC GCCGATTTCA AGGCGCGCAC GCTGTCGTAC
GGCGACCAGC GCCGCCTGGA GATCGCGCGC GCCCTGGCCA CCGATCCGCA ACTGATCGCG
CTGGACGAAC CCGCCGCCGG CATGAACGCC ACCGAGAAGG TGCAACTGCG CGAGCTGATC
GACCGCATCC GCAACGACAA CCGCACCATC TTGCTCATCG AGCACGACGT GAAGCTGGTC
ATGGGCCTGT GCGACCGTGT CACGGTGCTG GACTACGGCA AGCAGATTGC CGAGGGAACC
CCTGCCGACG TGCAGAAGAA CGAAAAAGTG ATCGAGGCCT ATCTGGGCAC CGGCGGGCAC
TGA
 
Protein sequence
MADTSKEVVL KVAGISKRFG GLQALSDVGI TIQRGQVYGL IGPNGAGKTT FFNVITGLYT 
PDAGSFELAG QPYEPRAVHL VAKAGIARTF QNIRLFADMT ALENVMVGRH IRTHSGLFGA
IFRTKSFKEE EAAIAKRAQE LLDYVGIGKY ADFKARTLSY GDQRRLEIAR ALATDPQLIA
LDEPAAGMNA TEKVQLRELI DRIRNDNRTI LLIEHDVKLV MGLCDRVTVL DYGKQIAEGT
PADVQKNEKV IEAYLGTGGH