Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3361 |
Symbol | |
ID | 4672707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3550563 |
End bp | 3551291 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840401 |
Product | ABC transporter related |
Protein accession | YP_987559 |
Protein GI | 121595663 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.413712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAA AATCCAACAA AGTTCTATTG CAGGTCAAGG GCCTGAAGGT GGCCTACGGC GGCATCCAGG CCGTCAAGGG GGTGGACTTC GAGGTGCGCG AGGGCGAGCT GGTCACATTG ATCGGCTCCA ACGGGGCGGG CAAGACCACC ACCATGAAGG CCATCACCGG CACACTGGGC ATGAACGATG GCGACATCGA GTACCTGGGC CAGAGCATCA AGGGCAAGGG CGCGTGGGAC CTGGTCAAGC AGGGGCTGGT GATGGTGCCC GAGGGGCGCG GCGTGTTCGC GCGCATGACC ATCACCGAGA ACCTGCTCAT GGGCGCCTAC ACGCGCGACG ACAAGGCGGG CATTGCCGCC GACATCGAAA AGATGTTCAC CATCTTCCCG CGCCTGCGCG AGCGCAAGGA CCAGCTGGCG GGCACCATGT CCGGTGGCGA GCAGCAGATG CTGGCCATGG GCCGCGCGCT GATGAGCCAG CCCAAGGTGC TGCTGCTGGA CGAGCCCTCC ATGGGCCTGT CGCCCATCAT GGTGGACAAG ATCTTCGAGG TGGTGCGCGA CGTGTACGCC CTGGGCGTGA CCATCGTGCT GGTGGAGCAG AACGCCAGCC GCGCGCTGGC GATTGCCGAC CGCGGCTACG TGATGGAGTC CGGCCTGATC ACCATGGCCG GCGGGGGACG GGATCTGCTC AGCGATCCGC GCGTGCGCGC CGCCTACCTG GGTGAGTGA
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Protein sequence | MAEKSNKVLL QVKGLKVAYG GIQAVKGVDF EVREGELVTL IGSNGAGKTT TMKAITGTLG MNDGDIEYLG QSIKGKGAWD LVKQGLVMVP EGRGVFARMT ITENLLMGAY TRDDKAGIAA DIEKMFTIFP RLRERKDQLA GTMSGGEQQM LAMGRALMSQ PKVLLLDEPS MGLSPIMVDK IFEVVRDVYA LGVTIVLVEQ NASRALAIAD RGYVMESGLI TMAGGGRDLL SDPRVRAAYL GE
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