Gene Ajs_3361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3361 
Symbol 
ID4672707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3550563 
End bp3551291 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID639840401 
ProductABC transporter related 
Protein accessionYP_987559 
Protein GI121595663 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.413712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA AATCCAACAA AGTTCTATTG CAGGTCAAGG GCCTGAAGGT GGCCTACGGC 
GGCATCCAGG CCGTCAAGGG GGTGGACTTC GAGGTGCGCG AGGGCGAGCT GGTCACATTG
ATCGGCTCCA ACGGGGCGGG CAAGACCACC ACCATGAAGG CCATCACCGG CACACTGGGC
ATGAACGATG GCGACATCGA GTACCTGGGC CAGAGCATCA AGGGCAAGGG CGCGTGGGAC
CTGGTCAAGC AGGGGCTGGT GATGGTGCCC GAGGGGCGCG GCGTGTTCGC GCGCATGACC
ATCACCGAGA ACCTGCTCAT GGGCGCCTAC ACGCGCGACG ACAAGGCGGG CATTGCCGCC
GACATCGAAA AGATGTTCAC CATCTTCCCG CGCCTGCGCG AGCGCAAGGA CCAGCTGGCG
GGCACCATGT CCGGTGGCGA GCAGCAGATG CTGGCCATGG GCCGCGCGCT GATGAGCCAG
CCCAAGGTGC TGCTGCTGGA CGAGCCCTCC ATGGGCCTGT CGCCCATCAT GGTGGACAAG
ATCTTCGAGG TGGTGCGCGA CGTGTACGCC CTGGGCGTGA CCATCGTGCT GGTGGAGCAG
AACGCCAGCC GCGCGCTGGC GATTGCCGAC CGCGGCTACG TGATGGAGTC CGGCCTGATC
ACCATGGCCG GCGGGGGACG GGATCTGCTC AGCGATCCGC GCGTGCGCGC CGCCTACCTG
GGTGAGTGA
 
Protein sequence
MAEKSNKVLL QVKGLKVAYG GIQAVKGVDF EVREGELVTL IGSNGAGKTT TMKAITGTLG 
MNDGDIEYLG QSIKGKGAWD LVKQGLVMVP EGRGVFARMT ITENLLMGAY TRDDKAGIAA
DIEKMFTIFP RLRERKDQLA GTMSGGEQQM LAMGRALMSQ PKVLLLDEPS MGLSPIMVDK
IFEVVRDVYA LGVTIVLVEQ NASRALAIAD RGYVMESGLI TMAGGGRDLL SDPRVRAAYL
GE