| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3359 |
|---|
| Symbol | |
|---|
| ID | 4672400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3549262 |
|---|
| End bp | 3549909 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639840399 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_987557 |
|---|
| Protein GI | 121595661 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
|---|
| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.312394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTTG GAAAGCTGTT GCCCCGCGAG GGCAATTTTT TCGAGATGTT CAACCAGCAT
GCAGACCGCA TCGTCGAGGC CGCGCGGGCG TTCTCGCAAC TGGTGGCGAA CTACAGCGAC
ACCCACCTGC GCGACCAGTA CAACCAGGAC GTGGACAACG CCGAGCGCGC CGCCGACCGC
GTGACGCACG AGGTCAACCG CACGCTGCAC AAGACCTTCA TCACGCCCAT TGACCGTGAG
CAGATCCACT CGCTGATCAA CACCATGGAC GACGTGGCCG ACCTGATCCA GGACTCGGCC
GAGACCATGG CGCTGTACGA CATCCACCAC ATGACGGACG AGATCACCCG CCTGACGGAC
CTCAGCCTCA AGTGCTGCGA GCGCGTGCAG GACGCGGTGA AGCTGCTGTC GCGCATTGCA
GATCCGGCCG TGGCCGAGGC CGCGCTCAAG ACCTGCGAGG AAATCGACCG CCTGGAGGGC
GACGCCGACC GCGTGCTGCG CAGCGCCATG AGCAAGCTGT TCCGCGAGGA GCCGGACGTG
CGCGAGGTCA TCAAGCTCAA GGCCATCTAC GAGCTGCTGG AGACCATCAC CGACCGCTGC
GAAGACGTGG CCAACCTCAT CGAGGGCATC ATCCTCGAGA ACTCCTGA
|
|---|
| Protein sequence | MLFGKLLPRE GNFFEMFNQH ADRIVEAARA FSQLVANYSD THLRDQYNQD VDNAERAADR
VTHEVNRTLH KTFITPIDRE QIHSLINTMD DVADLIQDSA ETMALYDIHH MTDEITRLTD
LSLKCCERVQ DAVKLLSRIA DPAVAEAALK TCEEIDRLEG DADRVLRSAM SKLFREEPDV
REVIKLKAIY ELLETITDRC EDVANLIEGI ILENS
|
|---|
| |