| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3353 |
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| Symbol | trmD |
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| ID | 4672279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3545239 |
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| End bp | 3546006 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639840393 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_987551 |
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| Protein GI | 121595655 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.74609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.240724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTCG ATGTCATCAC CCTGTTTCCC GAGCTGTTCG AGCCGTTTCT TGCCAGCGGC
GTGACGCGGC GCGCCTACGC GTCGGGCCAG GTAGAGGTGC GGCTGTGGAA CCCGCGCGAC
CATGCGGAGG GCAACTACCG CCGCGTGGAT GACCGGCCCT TTGGCGGCGG CCCCGGCATG
GTCATGCTGG CCGAGCCGCT GGCGCGCTGC CTGGCCGCCA TACGCGCCGA TCGCGCCGAG
GCCGAGCAGG CGCGGGCGCC CCTGGTGCTG TTCTCCCCCA TTGGCCGCCG GCTGGACCAT
GCCGCGGTGC AGGACTGGTC CGCTGGCGCG GGTGCCATCT TGCTGTGCGG ACGCTACGAG
GGCGTGGACC AGCGTTTCAT CGACGCCTAC GTGGATGCGC AGATCAGCCT CGGCGACTTC
GTGCTTTCGG GCGGCGAGAT CGCGGCCATG GCGCTGCTGG ACGCCGTGGC GCGCCTGCAG
CCGGGTGTGC TGCACGACGA GGGCAGCCAC CAGCTCGACA GCTTCAATCC CGCGCTGGAC
GGGCTGCTGG ACTGTCCGCA CTACACGCGC CCCGAGGAAT GGGCCGGCCG CGCCGTGCCC
GCGCCGCTGC TGTCTGGCCA CCATGCGCAA ATCGAGCGCT GGCGGCGCGA TCAGCGCCTG
CTCATCACTG CGCGCCACCG CCCGGACCTG TTGCAGGCCG CGCGCGAGCG CGGGCAGCTC
ACGCGCGCGG ACGAGGCCCT CTTGGCGCAA AACGCAAGCT TGCTATAA
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| Protein sequence | MRFDVITLFP ELFEPFLASG VTRRAYASGQ VEVRLWNPRD HAEGNYRRVD DRPFGGGPGM
VMLAEPLARC LAAIRADRAE AEQARAPLVL FSPIGRRLDH AAVQDWSAGA GAILLCGRYE
GVDQRFIDAY VDAQISLGDF VLSGGEIAAM ALLDAVARLQ PGVLHDEGSH QLDSFNPALD
GLLDCPHYTR PEEWAGRAVP APLLSGHHAQ IERWRRDQRL LITARHRPDL LQAARERGQL
TRADEALLAQ NASLL
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