Gene Ajs_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3351 
Symbol 
ID4671891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3543940 
End bp3544674 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID639840391 
ProductNUDIX hydrolase 
Protein accessionYP_987549 
Protein GI121595653 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.162982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCCCG TGAGTTCTCA TCGTCCTGCC GGCGCGTCCT CTGCGGCGGC CCTGCCTTCG 
CTGTCCTCGC TGCCTCACTT CGATCCGCGC ACCGTGCCGC TCGTAGGGGT GGACGACCAT
TTACCCGCCG TGCCCCCGCA TGCACAGACG CCGGAGGCAC TGCGCCTGCG CTTTGCCGCG
CCGCCGCCCT GGACGCCTGA GGTGCAGCGC GAGAAGAAGT TCGCGGAACG CGAGCCCGCG
CACGCCGCCG TCCTCGTGCC CATCGTGCTG CGCGATCGGC CCACGGTATT GCTCACCGAG
CGCACGGCGC ACCTGTCCAC GCATTCCGGC CAGGTGGCCT TTCCGGGAGG GCGCACCGAT
CCCGAAGACC GCGATGCCGC CGCCACCGCG CTGCGCGAGG CGCAGGAGGA GGTAGGCCTG
GAGCCGCACT GGGTCGAGGT GCTGGGCAAC CTGTCGATGT ATGTGACCGG CACCTCGTTC
CTCGTCACGC CGGTGGTCGC GCTGGTGCGG CCGGGCTTCG CGCTCCAGCC CAACCCGTAC
GAGGTGGCTG ACGTGTTCGA GGTGCCGCTG GACTTCCTGC TCAACCCCGC GCACCACGAG
CGTCACCGGC TGCAGTGGCA AGGCGCGCAG CGCGAATGGT TCGCCATGCC CTACCAGGAC
GGCGCGACGA CGCGCTACAT CTGGGGTGCC ACGGCTGGCA TGCTGCGCAA CTTCTACCGC
TTCATGATGG CCTGA
 
Protein sequence
MTPVSSHRPA GASSAAALPS LSSLPHFDPR TVPLVGVDDH LPAVPPHAQT PEALRLRFAA 
PPPWTPEVQR EKKFAEREPA HAAVLVPIVL RDRPTVLLTE RTAHLSTHSG QVAFPGGRTD
PEDRDAAATA LREAQEEVGL EPHWVEVLGN LSMYVTGTSF LVTPVVALVR PGFALQPNPY
EVADVFEVPL DFLLNPAHHE RHRLQWQGAQ REWFAMPYQD GATTRYIWGA TAGMLRNFYR
FMMA