| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3346 |
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| Symbol | |
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| ID | 4674185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3539571 |
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| End bp | 3540149 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639840386 |
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| Product | oligoribonuclease |
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| Protein accession | YP_987544 |
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| Protein GI | 121595648 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0311181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGACA CTGCCAACCC TACTGTTCCC GCGCTTGCCA AATCCGACCA GAACCTCGTC
TGGCTGGACT GTGAAATGAG CGGCCTCAAC CCCGAAACCG AACGCCTGCT GGAGATCGCC
GTGGTCGTCA CCAGTGCCGA CCTCACGCTG CGTGTCGAAG GGCCGGTGTT CGCCATCCAC
CAGGCGGACG CGGTGCTGGA CGGCATGGAC GCCTGGAACA AGGGCACGCA TGGCCGCAGC
GGCCTCATCG ACAAGGTGCG GGCCTCCACG GTCACCGAGG CCGATGCCGA GCGCGAGCTG
CTCGCCTTCC TGTCGCGCTA TGTACCCAAG GGCGTGGTGC CGATGTGCGG CAACAGCATT
GGGCAGGACC GGCGCTTCCT GGTGAAGTAC ATGCCCAAGC TGGAGGCGTT CTTCCACTAC
CGCAATGTGG ACGTGAGCAC GCTGAAGGAG CTGGCCAAGC GCTGGAAGCC CGAGGCCTAC
AGCTCGTTCA AGAAGGCGCA GCGCCACACG GCCCTGGCCG ATGTGCACGA ATCCATCGAC
GAACTACTGC ACTACCGCAC GCATCTGCTG GCCGTTTGA
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| Protein sequence | MSDTANPTVP ALAKSDQNLV WLDCEMSGLN PETERLLEIA VVVTSADLTL RVEGPVFAIH
QADAVLDGMD AWNKGTHGRS GLIDKVRAST VTEADAEREL LAFLSRYVPK GVVPMCGNSI
GQDRRFLVKY MPKLEAFFHY RNVDVSTLKE LAKRWKPEAY SSFKKAQRHT ALADVHESID
ELLHYRTHLL AV
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