Gene Ajs_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3327 
Symbol 
ID4670938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3524913 
End bp3525644 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID639840367 
Producthypothetical protein 
Protein accessionYP_987525 
Protein GI121595629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0613669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATGACA ACAAAAAAGG AGGAACCATG GTTCGCTATG CAGTTGCGCT CACCTCAATG 
CTTATGCTTC TCGGTTGCGC GAGCACTGCC AAGTGGCAGC ACCCCCTGGC TCCAAAAGAA
GATGCGGACA CGATGACTAT TGCGCTCGCT GAGTGCGAGA GTTACGCAGC GGGTATTACG
CCGATGCCCA AATTCCAAGG CTACATGCCA ATACCAAGTC CAACGTCTTA CACGACAACC
GGGACATTGA ACACGTACGG AAACTACTCC TCGTTTCAGG CAAACACCAC TGCAAATAGA
AGCTTTGCCG GTAACTACGC GGCTGGTGCG AATATGGGTG CAGACATCGC AAACGCCTTT
GCGGCCGCAG CAGCGAGGAA GCGCGAAGAG GAGCTGACCA AAGCTTGTAT GCGAAAGACC
GGCTGGATTG ATACCAGCAC TCCTGAAGGC GAAGCTCAGT TCAAGAAAGC CGTTGATGTA
GTGAGAGCTG AATCGGTATC TCGCGAAAAA CAAAAGACAG CCAATGAACA AGAATGGACC
ACTGCTATTC AGCAGCTTAT ACAAAGCGAG GCATCCCGGC CGGGCGGAAT CAATTACAAG
CGGGACACCT TCAAGCAGAC GCAGTTCGAC CTCTACATGG AGATAATCAC CAAAGACCCC
AAAAACCAAG ATAAATCACC TCAGTGGTTT GTGCGCGAGG CACATGAAAT GGTTTTGCGG
AATACAAGAT GA
 
Protein sequence
MDDNKKGGTM VRYAVALTSM LMLLGCASTA KWQHPLAPKE DADTMTIALA ECESYAAGIT 
PMPKFQGYMP IPSPTSYTTT GTLNTYGNYS SFQANTTANR SFAGNYAAGA NMGADIANAF
AAAAARKREE ELTKACMRKT GWIDTSTPEG EAQFKKAVDV VRAESVSREK QKTANEQEWT
TAIQQLIQSE ASRPGGINYK RDTFKQTQFD LYMEIITKDP KNQDKSPQWF VREAHEMVLR
NTR