| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3299 |
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| Symbol | |
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| ID | 4672976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3484522 |
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| End bp | 3486798 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639840338 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_987497 |
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| Protein GI | 121595601 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCGC GCTGCGCGCC ACGCGGTGAT GCGCCTGTGA GGTGGCGACG CGCCCTCGCG
GCGGCGTGTC TGGCGCTGGC CAGCACCGTC AGCCTGGCGC TGCCCACGTT CGATGAGGTG
CGCGCCGATT TCCGCTCGTC CGAGACCCTG GTGCTTTCGC GCGAGGGCGA GGTGCTGCAG
CGCCTGCGTA CCGACGCCAC CGTGCGCCGC GGCCAGTGGG TGGGCCTGGC CGATGTGTCG
CCCGCGCTGC GCCAGGCGCT GGTGCTGAGC GAGGACCGGC GCTTTTACGA GCACAGCGGC
GTGGACTGGG CCGCGGTGTC GGCCGCCGCC TGGGGCAACC TGTGGAACCA GCGCACGCGC
GGCGCCAGCA CGTTGACCAT GCAGTTGGCG GGGCTGCTCG ACGGCCCGGA TGCCGATTTC
TTGCGCCAGG GCCCCGGTGG GCGCAGCGTG CCGCAGAAGC TGGGGCAGGC CGTGGCCGCG
CAGGTGCTGG ACCGACGCTG GCGCAAGGAC CAGATCCTGG AGGCGTACCT GAACCTGGTG
CCGTTTCGCG GGGAGATCGT GGGCATCGAC GCGCTGGCGC GCACGCTGTT CGGCAAAGCC
GCGCACGGCC TGGATGAGCG AGAGGCCGCC GTGGCCGCGG CCCTGGTGCG CGCGCCCAAT
GCGCGGCCCG CATTGGTGGC CCGGCGCGCC TGCGGCGTGC TGCGCGACAT GCAACGGGCG
GGCCACAGCG GCGCGCAGGG TGCCGATTGC GACGCGCTGG ACCTGTTCAC CACCGCCGCG
TTGCAGCGCC GCGCGTTCGA CGCCAGCCAG GGCATCGCGC CACACTTCGC GCGCCAGCTG
CTGCGCCAGG CGGCGCGCAT GCCGTCGGGC AGTGCGCAGC AGCGCGTGCG CTCCACGCTC
AGCGCGCCGC TGCAGCGCAT GGCGGTGGAC ACGCTCACGC GCCACCTGCG CGAGCTGCGC
GGGCGCAACG TGGAAGACGC CGCGCTGGTG GTGCTCGACA ACGCCACGGG CGAGGTGCTG
GCCTGGGTGG GCTCGTCCGG CCCCTTGAGC CAGGCGGCCG AGGTGGATGG CGTGCTGGCC
CTGCGCCAGC CCGGCTCCAC GCTCAAGCCC TTCCTGTACG CGCAGGCGAT TGCCCAGCGG
CGGCTCACGG CCGCCTCGCT GGTGCACGAT TCGCCCGCGC ACATCGCCAC CGCCGGCGGG
CTCTACATCC CGCAAAACTA CGACCGCCAG TTCAAGGGCT GGGTGTCCGC GCGCACCGCG
CTGGCCGCCT CGCTGAACGT GCCGGCGGTA CGCACGCTGG TGATGGTGAC ACCCGACGCC
TTCTTCGAGC AACTGCGGCG CCTGGGCCTG CCGCTGCCGG AATCGGGCGG CTATTACGGC
TACAGCCTGG CGCTGGGCAG CAGCGAGGTG CCGCTGCTGC ACCTGACCAA TGCCTACCGT
GCGCTGGCCA ACGGCGGGCG CCTGAGCCCC GTGGCCTATG CGCCTGCGCA GCGCCCGGCG
TTCACGCCGG CGCTGGATGC CGGCGCGGCC TTCATCGTGG GGGACATCCT GTCGGATGCC
AACGCGCGCG TGCGCACCTT CGGCACCGAC AGCGTGCTGG CCACGCGCTT CTGGACGGCG
GTGAAAACCG GCACCAGCAA GGACATGCGC GACAACTGGG CCGTGGGCTG GTCGCAGCGC
TACACCGTGG GCGTGTGGGT GGGCAACGCC AGCGGCGCCG CCATGCATGA CGTGAGCGGC
ACCAGCGGCG CAGCGCCCAT CTGGGCCGAG GTCATGGGCT GGCTGCACCG CAGCACGCCC
AGCCGCGCGC CGCGCCCGCC ACAGGGCCTG GTGCGGCAGG CGGTGCGCTT CGGGCCGGGC
GACGGCGGCC AGCCGCTGGA GGGTGCGCGG CAGGAGTGGT TCATGGGCGG CACGCAGCAA
GCGTTATTTG CTATCGAAAG TGAAGCTGGT GGCGCAAGCG AGACGGGCGT TACAGGCACA
AATGATGCAA GTCCTGAGGC GGTAGCGGCG CGCATCCTGG CGCCGGCGTC GGGCACCGTG
GTGGCGCTGG ACCCGGACAT TCCGCCCGCG CACCAGCGCC TGCAATTCAC GGCGGGCGGT
GTGGGCCGCG CGGCGGTGCG CTGGCGCATC GACGGGCGGA TGGCCGGCAG CGGCGCGCAG
TGGGCATGGC TGCCTTGGCC GGGCCGCCAC CGCGTGGAGC TGGTGGACGC CCAGGGCAAG
GTACTGGACC AGGTGCAGAT CGAGGTGCGC GGCGCGGGCG TGCGCGCGCG GCGCTGA
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| Protein sequence | MQPRCAPRGD APVRWRRALA AACLALASTV SLALPTFDEV RADFRSSETL VLSREGEVLQ
RLRTDATVRR GQWVGLADVS PALRQALVLS EDRRFYEHSG VDWAAVSAAA WGNLWNQRTR
GASTLTMQLA GLLDGPDADF LRQGPGGRSV PQKLGQAVAA QVLDRRWRKD QILEAYLNLV
PFRGEIVGID ALARTLFGKA AHGLDEREAA VAAALVRAPN ARPALVARRA CGVLRDMQRA
GHSGAQGADC DALDLFTTAA LQRRAFDASQ GIAPHFARQL LRQAARMPSG SAQQRVRSTL
SAPLQRMAVD TLTRHLRELR GRNVEDAALV VLDNATGEVL AWVGSSGPLS QAAEVDGVLA
LRQPGSTLKP FLYAQAIAQR RLTAASLVHD SPAHIATAGG LYIPQNYDRQ FKGWVSARTA
LAASLNVPAV RTLVMVTPDA FFEQLRRLGL PLPESGGYYG YSLALGSSEV PLLHLTNAYR
ALANGGRLSP VAYAPAQRPA FTPALDAGAA FIVGDILSDA NARVRTFGTD SVLATRFWTA
VKTGTSKDMR DNWAVGWSQR YTVGVWVGNA SGAAMHDVSG TSGAAPIWAE VMGWLHRSTP
SRAPRPPQGL VRQAVRFGPG DGGQPLEGAR QEWFMGGTQQ ALFAIESEAG GASETGVTGT
NDASPEAVAA RILAPASGTV VALDPDIPPA HQRLQFTAGG VGRAAVRWRI DGRMAGSGAQ
WAWLPWPGRH RVELVDAQGK VLDQVQIEVR GAGVRARR
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