Gene Ajs_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3296 
Symbol 
ID4673269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3480660 
End bp3481859 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content68% 
IMG OID639840335 
ProductDNA-directed DNA polymerase 
Protein accessionYP_987494 
Protein GI121595598 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTA CTGCCTCTGA TCGCCGCATC GCCCACCTCG ACATGGATGC GTTCTACGCC 
TCCGTCGAAC TGCTGCGCTA CCCGCAACTC AAAGGGCTGC CCGTGGTGAT CGGCGGCGGC
CGCCGTCCGC AGGACGAAGC GCTGGCCGCT GCCTACGCCG GGCGGCCGGG GGATATTCCG
GTGGCGGCGT TTGCGCTGCT GAAGGACTAC GCGGGCCGCG GTGTGATCAC CACCGCCACC
TATGCGGCGC GCCAGTTCGG CGTGGGCTCG GCCATGGGGC TGATGAAGGC CGCGCGCCTG
TGTCCGCAGG CCGTGCTGCT GCCGGTGGAC TTTGCTGCCT ACCGTCGCTA CTCCAGGCTT
TTCAAAGAGG TAATCCTCTC CATCGCGCCG GTCATGGAAG ACCGCGGCGT GGACGAGGTG
TACATCGACT TTACGCGAGT AGCGGGCGGC CAGCGCGACG GCGGGCGGGT GCTGGCGCGG
CTGATCCAGA AGAGCATCTT CGACGCCACG GGGCTGACCT GCTCGATCGG CGTGGCGCCC
AACAAGCTCA TCGCCAAGAT GGCGAGCGAG TTCAACAAGC CCAATGGCAT CTCCATCGTG
CAGCCAGGCG ACCTGCAGCC CCTGATCTGG CCGCTGGACT GCCGCAAGAT CAACGGCGTG
GGCCCCAAGG CCGAGGCCAG GCTGCTCGCC CACGGCATCC GCACCATTGG CGAACTGGCC
CAGCGGCCGC TGCCGTGGCT GATGCAGCAG TTCGGGCGTT CCTACGGTGC CTGGCTGCAC
GACGCGGCCT GGGGGCGCGA CGAGCGCGCG GTGGTGACCG AGAGCGAGCC CGTCTCCATG
AGCCGCGAAA CCACCTTTGA GCGCGACCTG CACGCGGTGC ACGACCGCGC CGAACTGGGC
CGCATCTTCA CCGCACTGTG CGAGCAGGTG GCGGGGGACC TGATTGCTAA GGGCTACGCG
GGCCGCACCA TCGGCATCAA GCTGCGCTAC GACGATTTCA AGATCGCCAC TCGCGATCAG
ACAGTGGCGG ACTTCACCCA GGATGCGGCC ACCATCCGCC GCGTGGCGGG CCTGTGCCTC
AAACGCGTGC CCTTGACCAA GCGCCTGCGC CTGCTGGGCG TGCGCGTGGG CAACCTGCTG
CCCCAGGCAG CCGTTGCCCA GCAGGCGGCG GGTTGGGGCG AAAGCGCGCC GTTGTTCTGA
 
Protein sequence
MTATASDRRI AHLDMDAFYA SVELLRYPQL KGLPVVIGGG RRPQDEALAA AYAGRPGDIP 
VAAFALLKDY AGRGVITTAT YAARQFGVGS AMGLMKAARL CPQAVLLPVD FAAYRRYSRL
FKEVILSIAP VMEDRGVDEV YIDFTRVAGG QRDGGRVLAR LIQKSIFDAT GLTCSIGVAP
NKLIAKMASE FNKPNGISIV QPGDLQPLIW PLDCRKINGV GPKAEARLLA HGIRTIGELA
QRPLPWLMQQ FGRSYGAWLH DAAWGRDERA VVTESEPVSM SRETTFERDL HAVHDRAELG
RIFTALCEQV AGDLIAKGYA GRTIGIKLRY DDFKIATRDQ TVADFTQDAA TIRRVAGLCL
KRVPLTKRLR LLGVRVGNLL PQAAVAQQAA GWGESAPLF