| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3274 |
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| Symbol | |
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| ID | 4673753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3459753 |
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| End bp | 3460388 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639840314 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_987473 |
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| Protein GI | 121595577 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0690912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.387372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACCC CATCGCCCGC GCCCCAAGAG CCCGCCGACA GTGATCTGCG ATTGGTCGAG
CGCACCGTCG CGGGGGACCA GCGGGCTTAT GAACTTCTGG TCATCAAATA CCAGCGGCGC
ATCGAGCGCC TCGTGGCGCG TATGGTGCGC GATACCGATC TGGTGGCCGA CATCACGCAG
GAAACCTTTC TGCGTGCCTA CCGAGCCTTG TACCAGTTCC GTGGAGAGGC ACAGTTCTAT
ACCTGGCTCT ACCGCATCGC CGTGAACACC GCCAAGAAGG CGCTGGTAGA CATGAAACGC
AATCCGGTTG TCACGGAGAG CGCTCTTCGC GGCAGCAGCG ACTCCGAAGA TGAAACTTCC
TTCCTGGATC GTGAACTAAT CAGCGACGAA ACCCCCGAAA CCGTGTTGGC GGCCCAGGAA
ATCGCTGCCG CTGTCAATGC GGCCATGGAG GCATTGCCCG AGGATTTGCG GCAGGCCGTG
ACTCTGCGGG AGATCGAGGG GTTGAGTTAC GAGGAAATTG CCGTAGCCAT GGAATGCCCC
ATCGGTACGG TGCGCTCGCG GATCTTCCGT GCGCGCGAGG CAATTTCCGC GCGGGTCAAG
CCTTTGCTGG AGAGGCGCTC CGGCAAGCGG TGGTAG
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| Protein sequence | MTTPSPAPQE PADSDLRLVE RTVAGDQRAY ELLVIKYQRR IERLVARMVR DTDLVADITQ
ETFLRAYRAL YQFRGEAQFY TWLYRIAVNT AKKALVDMKR NPVVTESALR GSSDSEDETS
FLDRELISDE TPETVLAAQE IAAAVNAAME ALPEDLRQAV TLREIEGLSY EEIAVAMECP
IGTVRSRIFR AREAISARVK PLLERRSGKR W
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