| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3272 |
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| Symbol | |
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| ID | 4673669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3457998 |
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| End bp | 3459023 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639840312 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_987471 |
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| Protein GI | 121595575 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.215097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.161649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTGCT GCCGCAGGTT GCGGTCATGG TGGTTGGTGT GTGGCGGTTT GATGCTCTGT
GGCGTGGCTG CGGCGAACTG CATGTCAGGC CCTGCACCAA CGACCCCTGG CGAACCACGC
GACGTGGCGG AGTGGGTTGC GCGCATGCAC CATGCTTCGC TGTTTCGCAG CTACCGTGGC
ACGTTCGTGG TTCTTTCTTC CAATGGGGCC ATGGTCAGTT CCCGGATCTG GCATGCCTGC
GAGGGTGCGC GGCAAATTGA GCGGGTCGAG GCGCTGAGCG GAACACCACG GGTGGTCTTC
CGGCGCGAAG AGGAGGTCCG CACCTTCCTT CCGCAGGCCC GTGTGGTACG CAGCGAACTG
CGCGACGTGC CCGGTGCTTT TCCGCGTGTT GCCGACGCCA AGGGTGTCCA TCCTTCGCAG
CATTACGCAC TGCGGGCGCT TGGGCAGGAG CGCGTGGCCG GGAGGGATGC CGATCGGCTT
TTATTCCAGC CCCGTGACGC CTGGCGATTC GGCTACCAGA TCTGGGTGGA TCGCGTGTCT
GGACTGGTTG TCAAGATGCA GACCTTGGAC GGCGAGGGGC GGCTCCTGGA GCAGGCGGCG
TTTTCGGAAC TGAATCTGGA TGCCCCGGCG GATCTGTCGC GCATCGAACA GATGATGGAG
GACTTGCAGG GGTATCGTCT CGTAAAGGTC CCTCTTCAGC GGACGACGGC CGAAGCGCAA
GGCTGGACCA TGGGCAAGGC GGTGGCCGGA TTCGTCTCCC AGGGCTGCTA TCGCAAAGAC
GTGATGGCCA TGGCGTCCGG CCCGCTGTTG CAGTGCATTT ACTCAGACGG ATTGGCCACG
CTCTCCGTCT TCGTGGAGCC GTTCGATGCC GCACGCCATG CTGCATCTGT GCGCAGTGCC
AGTATGGGCG CCACACAAGT GGTGGGCCGG CAGGTGCACA AAACTGCCTG GGTGACCGCT
GTGGGGGAAG TTCCTGCCCG AACGCTCCAG CGGTTCATCG AGTCCGTCCA ACGCAAGGAC
GAATGA
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| Protein sequence | MQCCRRLRSW WLVCGGLMLC GVAAANCMSG PAPTTPGEPR DVAEWVARMH HASLFRSYRG
TFVVLSSNGA MVSSRIWHAC EGARQIERVE ALSGTPRVVF RREEEVRTFL PQARVVRSEL
RDVPGAFPRV ADAKGVHPSQ HYALRALGQE RVAGRDADRL LFQPRDAWRF GYQIWVDRVS
GLVVKMQTLD GEGRLLEQAA FSELNLDAPA DLSRIEQMME DLQGYRLVKV PLQRTTAEAQ
GWTMGKAVAG FVSQGCYRKD VMAMASGPLL QCIYSDGLAT LSVFVEPFDA ARHAASVRSA
SMGATQVVGR QVHKTAWVTA VGEVPARTLQ RFIESVQRKD E
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